RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 RBM15BQ8NDT2 890 aaKnown RBP11.19□□□□□ -0.62
COL4A5-201ENST00000328300 ZNF563Q8TA94 476 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 ZNF483Q8TF39 744 aaPredicted RBP11.19□□□□□ -0.62
COL4A5-201ENST00000328300 TRMT2BQ96GJ1 504 aaKnown RBP11.19□□□□□ -0.62
COL4A5-201ENST00000328300 MYH7P12883 1935 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 WASH4PA8MWX3 477 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 PCDH7O60245 1069 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 PRG2P13727 222 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 DUSP3P51452 185 aaPredicted RBP11.19□□□□□ -0.62
COL4A5-201ENST00000328300 PIGXQ8TBF5 258 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 CAPN14A8MX76 684 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 TCF4P15884 667 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 ABATP80404 500 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 CYP4F3Q08477 520 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 DCTN2Q13561 401 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 KCTD21Q4G0X4 260 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 PDZK1Q5T2W1 519 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 LCN1P1Q5VSP4 162 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 RTL4Q6ZR62 310 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 LRRC3Q9BY71 257 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 RSL24D1Q9UHA3 163 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 DGKEP52429 567 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 ZNF33BQ06732 778 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 ELAVL3Q14576 367 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 PDCD4Q53EL6 469 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 KIAA1161Q6NSJ0 714 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 OAFQ86UD1 273 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 WDTC1Q8N5D0 677 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 FAM120CQ9NX05 1096 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 MCIDASD6RGH6 385 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 GPX6P59796 221 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 C1QTNF8P60827 252 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 CLEC6AQ6EIG7 209 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 PACRGLQ8N7B6 248 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 ZNF540Q8NDQ6 660 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 FIBINQ8TAL6 211 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 EXOSC8Q96B26 276 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 TRIM8Q9BZR9 551 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 NEUROD4Q9HD90 331 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 MAT2BQ9NZL9 334 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 SPATA7Q9P0W8 599 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 MYADML2A6NDP7 307 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 H3BNX3 289 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 POP7O75817 140 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 STC2O76061 302 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 RGS8P57771 180 aaPredicted RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 DCST1Q5T197 706 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 MPP7Q5T2T1 576 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 STEAP4Q687X5 459 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 TMPRSS11AQ6ZMR5 421 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 CXXC5Q7LFL8 322 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 KCNN1Q92952 543 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 PLEKHG4BQ96PX9 1271 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 NSUN3Q9H649 340 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 MOCS1Q9NZB8 636 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 CCL22O00626 93 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 HLA-DQA2P01906 255 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 COX10Q12887 443 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 FAAH2Q6GMR7 532 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 GPR65Q8IYL9 337 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 CPXM2Q8N436 756 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 FAM13CQ8NE31 585 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 ANKRD49Q8WVL7 239 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 HMGB4Q8WW32 186 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 S100ZQ8WXG8 99 aa11.18□□□□□ -0.62
COL4A5-201ENST00000328300 LENG8Q96PV6 779 aaPredicted RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 NOL6Q9H6R4 1146 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 WBP11Q9Y2W2 641 aaKnown RBP11.18□□□□□ -0.62
COL4A5-201ENST00000328300 PIAS1O75925 651 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 CNTN5O94779 1100 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ECDO95905 644 aaPredicted RBP11.17□□□□□ -0.62
COL4A5-201ENST00000328300 AHSGP02765 367 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 SYN1P17600 705 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 AGXTP21549 392 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ZNF311Q5JNZ3 666 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 SLC39A11Q8N1S5 342 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ERLEC1Q96DZ1 483 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 EXO5Q9H790 373 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 MVB12BQ9H7P6 319 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 B4GALT6Q9UBX8 382 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 DHRS7Q9Y394 339 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 AP4B1Q9Y6B7 739 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 TNFRSF11BO00300 401 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 TEX28O15482 410 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 NIPSNAP2O75323 286 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ARHGEF15O94989 841 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 SLBPQ14493 270 aaKnown RBP eCLIP11.17□□□□□ -0.62
COL4A5-201ENST00000328300 QPCTQ16769 361 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 B3GNT6Q6ZMB0 384 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 CACTIN-AS1Q8N1I8 211 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 OR9A1PQ8NGU1 263 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 C10orf82Q8WW14 230 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 BADQ92934 168 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 RFKQ969G6 155 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 C1orf21Q9H246 121 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ITGB1BP2Q9UKP3 347 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 ADAMTS7Q9UKP4 1686 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 PSMD11O00231 422 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 CLDN7O95471 211 aa11.17□□□□□ -0.62
COL4A5-201ENST00000328300 NEDD8Q15843 81 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms