RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ASB1Q9Y576 335 aa9.96□□□□□ -0.81
VIPAS39-201ENST00000327028 E2F3O00716 465 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 HSPA4LO95757 839 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 IMPA1P29218 277 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 CCR10P46092 362 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 GALNT1Q10472 559 aaPredicted RBP9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 C1orf61Q13536 156 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 ARL13AQ5H913 290 aaPredicted RBP9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 AGTRAPQ6RW13 159 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 PRR23BQ6ZRT6 265 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 GKN2Q86XP6 184 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 LSMEM2Q8N112 164 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 ZNF548Q8NEK5 533 aaPredicted RBP9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 LMX1AQ8TE12 382 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 PPP4R1Q8TF05 950 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 MOCOSQ96EN8 888 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 NSUN5Q96P11 429 aaKnown RBP9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 PITPNM3Q9BZ71 974 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 C20orf27Q9GZN8 174 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 ZNF395Q9H8N7 513 aaPredicted RBP9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 OPTCQ9UBM4 332 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 TDRKHQ9Y2W6 561 aaKnown RBP9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 SNX11Q9Y5W9 270 aa9.96□□□□□ -0.82
VIPAS39-201ENST00000327028 TMEM131Q92545 1883 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 KNL1Q8NG31 2342 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 TDRD6O60522 2096 aaKnown RBP9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 A0A0C4DFX4 3053 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 OR5K4A6NMS3 321 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 K7EPI3 171 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 STK16O75716 305 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 PIAS2O75928 621 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC16A8O95907 504 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 CHRNGP07510 517 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 ERGP11308 486 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 PIK3CGP48736 1102 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 CLCQ05315 142 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 LCP2Q13094 533 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 ARHGAP19Q14CB8 494 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 DUOXA1Q1HG43 343 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 ZXDCQ2QGD7 858 aaPredicted RBP9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 IYDQ6PHW0 289 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 ATG14Q6ZNE5 492 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 RPS27LQ71UM5 84 aaKnown RBP9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 CRLF3Q8IUI8 442 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 CEP76Q8TAP6 659 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 ZNF480Q8WV37 535 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 ESAMQ96AP7 390 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 CAMK1GQ96NX5 476 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 KIR3DX1Q9H7L2 352 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 EML4Q9HC35 981 aaKnown RBP9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 CIDEBQ9UHD4 219 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 HAO1Q9UJM8 370 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 COLEC10Q9Y6Z7 277 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 ARHGEF17Q96PE2 2063 aaPredicted RBP9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 SDK1Q7Z5N4 2213 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 KIR2DS5A0A0G2JLQ3 304 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 A0A0G2JNG1 304 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 KIR2DS3K7RE56 304 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 AQP9O43315 295 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 CCNT2O60583 730 aaKnown RBP9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 MLYCDO95822 493 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 HSD17B2P37059 387 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 PRKAA1Q13131 559 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 PRKG2Q13237 762 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 GTF2H2Q13888 395 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 KRT33BQ14525 404 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 KIR2DS5Q14953 304 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 PTCHD3Q3KNS1 767 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 GTF2H2CQ6P1K8 395 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 GOLGA7Q7Z5G4 137 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 OR56A3Q8NH54 315 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 CXorf40BQ96DE9 158 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 LOXL4Q96JB6 756 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 RAB11FIP5Q9BXF6 653 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 ZNF624Q9P2J8 865 aaPredicted RBP9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 PLAGL1Q9UM63 463 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 STK38LQ9Y2H1 464 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 RAP2CQ9Y3L5 183 aa9.95□□□□□ -0.82
VIPAS39-201ENST00000327028 PI4KAP42356 2102 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 PCDH15Q96QU1 1955 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ZNF839A8K0R7 811 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 LMO7DNF2Z398 122 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 KDM1AO60341 852 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 EPN2O95208 641 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 PKLRP30613 574 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 GDF5P43026 501 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 RXRGP48443 463 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 PNLIPRP1P54315 467 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 CDH13P55290 713 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 CYP2A13Q16696 494 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ZNF423Q2M1K9 1284 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 CGB2Q6NT52 195 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 CUZD1Q86UP6 607 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 SFRP1Q8N474 314 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 RAB42Q8N4Z0 105 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 TEX9Q8N6V9 391 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 TRPC4APQ8TEL6 797 aa9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 ELF4Q99607 663 aaPredicted RBP9.94□□□□□ -0.82
VIPAS39-201ENST00000327028 MENTQ9BUN1 341 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms