RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 VCX3AQ9NNX9 186 aa20.9■□□□□ 0.94
LIMS2-201ENST00000324938 SNX6Q9UNH7 406 aa20.9■□□□□ 0.94
LIMS2-201ENST00000324938 V9GYQ6 96 aa20.9■□□□□ 0.94
LIMS2-201ENST00000324938 TSPAN11A1L157 253 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 PABPN1LA6NDY0 278 aaKnown RBP20.89■□□□□ 0.94
LIMS2-201ENST00000324938 CFAP99D6REC4 459 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 RFPL2O75678 378 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 PTPN2P17706 415 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 CYP2A7P20853 494 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 PTCHD3Q3KNS1 767 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 PYCR3Q53H96 274 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 LY6G5CQ5SRR4 150 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 HSD11B1LQ7Z5J1 315 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 MSRB3Q8IXL7 192 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 L3MBTL4Q8NA19 623 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 ZNF548Q8NEK5 533 aaPredicted RBP20.89■□□□□ 0.94
LIMS2-201ENST00000324938 OR2T12Q8NG77 320 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 SELENOMQ8WWX9 145 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 MTFMTQ96DP5 389 aaKnown RBP20.89■□□□□ 0.94
LIMS2-201ENST00000324938 PAWRQ96IZ0 340 aaKnown RBP20.89■□□□□ 0.94
LIMS2-201ENST00000324938 BEGAINQ9BUH8 593 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 BDH2Q9BUT1 245 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 LINC00597Q9H2U6 94 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 FAM83DQ9H4H8 585 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 CLK4Q9HAZ1 481 aaKnown RBP20.89■□□□□ 0.94
LIMS2-201ENST00000324938 TBC1D14Q9P2M4 693 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.89■□□□□ 0.94
LIMS2-201ENST00000324938 SLC8A2Q9UPR5 921 aa20.89■□□□□ 0.94
LIMS2-201ENST00000324938 ZBBXA8MT70 800 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 MT-ND1P03886 318 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 GNAO1P09471 354 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 AP1S2P56377 157 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 RPS14P62263 151 aaKnown RBP20.89■□□□□ 0.93
LIMS2-201ENST00000324938 PLPP4Q5VZY2 271 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 NEK5Q6P3R8 708 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 TNIP2Q8NFZ5 429 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 ITFG1Q8TB96 612 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 FRS2Q8WU20 508 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 ELOVL6Q9H5J4 265 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 GORASP2Q9H8Y8 452 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 CD320Q9NPF0 282 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 IL23AQ9NPF7 189 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 SMPD3Q9NY59 655 aaPredicted RBP20.89■□□□□ 0.93
LIMS2-201ENST00000324938 SLC25A37Q9NYZ2 338 aa20.89■□□□□ 0.93
LIMS2-201ENST00000324938 NFKBIL1Q9UBC1 381 aaPredicted RBP20.89■□□□□ 0.93
LIMS2-201ENST00000324938 TRBV5-3A0A0A0MS03 114 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 NPIPB8E9PQR5 432 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 SGTAO43765 313 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 AP2A2O94973 939 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 RHOP08100 348 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 RAP2AP10114 183 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 TUBA4AP68366 448 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 LSAMPQ13449 338 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 KCTD21Q4G0X4 260 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 RASGRP3Q8IV61 690 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 MRPL43Q8N983 215 aaKnown RBP20.88■□□□□ 0.93
LIMS2-201ENST00000324938 DNAJB8Q8NHS0 232 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 ZFP28Q8NHY6 868 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 MYLIPQ8WY64 445 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 SCAMP4Q969E2 229 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 MRGPRX3Q96LB0 322 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 OR52E6Q96RD3 313 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 SH3GL1Q99961 368 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 P2RY13Q9BPV8 354 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 IKZF5Q9H5V7 419 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 PTTG2Q9NZH5 202 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 DLGAP4Q9Y2H0 992 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 AP3M1Q9Y2T2 418 aa20.88■□□□□ 0.93
LIMS2-201ENST00000324938 MTX2O75431 263 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 GMNNO75496 209 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 LEFTY1O75610 366 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 PRPS2P11908 318 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 POLR2EP19388 210 aaKnown RBP20.87■□□□□ 0.93
LIMS2-201ENST00000324938 RPS9P46781 194 aaKnown RBP20.87■□□□□ 0.93
LIMS2-201ENST00000324938 CLDN8P56748 225 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 MAP7Q14244 749 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 FAM98BQ52LJ0 330 aaKnown RBP20.87■□□□□ 0.93
LIMS2-201ENST00000324938 RUNDC3AQ59EK9 446 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 FAM9CQ8IZT9 166 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 CLHC1Q8NHS4 586 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 NMD3Q96D46 503 aaKnown RBP20.87■□□□□ 0.93
LIMS2-201ENST00000324938 VPS50Q96JG6 964 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 THUMPD3Q9BV44 507 aaKnown RBP20.87■□□□□ 0.93
LIMS2-201ENST00000324938 DNAJC11Q9NVH1 559 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 MARK1Q9P0L2 795 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 SOBPA7XYQ1 873 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 UPK3BL1B0FP48 263 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 UPK3BL2E5RIL1 263 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 AREL1O15033 823 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 CLOCKO15516 846 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 PRSS23O95084 383 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 NFKBIAP25963 317 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 ALDH3B2P48448 385 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 RTL10Q7L3V2 364 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 TRAM1L1Q8N609 369 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 DDHD1Q8NEL9 900 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 OR10A6Q8NH74 314 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 MCOLN3Q8TDD5 553 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 ELMO1Q92556 727 aa20.87■□□□□ 0.93
LIMS2-201ENST00000324938 PCDH12Q9NPG4 1184 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms