RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 SERPINB11Q96P15 392 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 CSPG4P5Q96PW8 444 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 GSX2Q9BZM3 304 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 ULBP1Q9BZM6 244 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 ZWILCHQ9H900 591 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.43□□□□□ -1.38
CSTF3-201ENST00000323959 FAM153AQ9UHL3 310 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 DNPEPQ9ULA0 475 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 TLR6Q9Y2C9 796 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 GTF3C1Q12789 2109 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 ERI2A8K979 691 aaKnown RBP6.43□□□□□ -1.38
CSTF3-201ENST00000323959 AP3B1O00203 1094 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 CST8O60676 142 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 MMP20O60882 483 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 FDFT1P37268 417 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 TNFSF10P50591 281 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 CDH6P55285 790 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 ADCY2Q08462 1091 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 ILF2Q12905 390 aaKnown RBP6.43□□□□□ -1.38
CSTF3-201ENST00000323959 KCNJ11Q14654 390 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 C15orf59Q2T9L4 293 aaPredicted RBP6.43□□□□□ -1.38
CSTF3-201ENST00000323959 SLC25A35Q3KQZ1 300 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 ATP13A4Q4VNC1 1196 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 CXorf57Q6NSI4 855 aaKnown RBP6.43□□□□□ -1.38
CSTF3-201ENST00000323959 ZNF683Q8IZ20 524 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 SIDT2Q8NBJ9 832 aaKnown RBP6.43□□□□□ -1.38
CSTF3-201ENST00000323959 ACTL9Q8TC94 416 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 FUBP1Q96AE4 644 aaKnown RBP6.43□□□□□ -1.38
CSTF3-201ENST00000323959 MAP3K3Q99759 626 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 TRIM51Q9BSJ1 452 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 SSU72Q9NP77 194 aaKnown RBP6.43□□□□□ -1.38
CSTF3-201ENST00000323959 ST7Q9NRC1 585 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 KLHL3Q9UH77 587 aa6.43□□□□□ -1.38
CSTF3-201ENST00000323959 WBP11Q9Y2W2 641 aaKnown RBP6.43□□□□□ -1.38
CSTF3-201ENST00000323959 TMEM202A6NGA9 273 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 RIPK2O43353 540 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 SUN1O94901 812 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 IVLP07476 585 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 LCP1P13796 627 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 CCNFP41002 786 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 RGS7P49802 495 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 ELP6Q0PNE2 266 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 GALNT2Q10471 571 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 PPP1R7Q15435 360 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 RABGAP1LQ5R372 815 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 KCTD16Q68DU8 428 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 ZNF354CQ86Y25 554 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 LGI2Q8N0V4 545 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 FBXO25Q8TCJ0 367 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 CLEC4CQ8WTT0 213 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 C1orf54Q8WWF1 131 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 P3H4Q92791 437 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 SLC41A2Q96JW4 573 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 SERPINB12Q96P63 405 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 ZIM3Q96PE6 472 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 C2orf49Q9BVC5 232 aaPredicted RBP6.42□□□□□ -1.38
CSTF3-201ENST00000323959 MAK16Q9BXY0 300 aaKnown RBP6.42□□□□□ -1.38
CSTF3-201ENST00000323959 STMN4Q9H169 189 aaPredicted RBP6.42□□□□□ -1.38
CSTF3-201ENST00000323959 OR1A2Q9Y585 309 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 SLC9B1P1A6NJY1 282 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 YJEFN3A6XGL0 299 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 E7ENQ6 273 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 MYO1CO00159 1063 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 TTC4O95801 387 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 SERPINB6P35237 376 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 RORAP35398 523 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 ARL4AP40617 200 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 DEUP1Q05D60 604 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 PPIDQ08752 370 aaKnown RBP6.42□□□□□ -1.38
CSTF3-201ENST00000323959 KRT81Q14533 505 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 TAF5Q15542 800 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 ODF2Q5BJF6 829 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 CARD16Q5EG05 197 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 DPY19L3Q6ZPD9 716 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 SLC9B2Q86UD5 537 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 SLC37A2Q8TED4 501 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 PATE1Q8WXA2 126 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 MYEOVQ96EZ4 313 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 RAB33BQ9H082 229 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 KLC2Q9H0B6 622 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 CARS2Q9HA77 564 aaKnown RBP6.42□□□□□ -1.38
CSTF3-201ENST00000323959 PIGVQ9NUD9 493 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 EPHA6Q9UF33 1036 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 ITM2BQ9Y287 266 aa6.42□□□□□ -1.38
CSTF3-201ENST00000323959 C17orf113A0A1B0GUU1 675 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 DYTNA2CJ06 578 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 H3BQF6 201 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 RNF103O00237 685 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 MEN1O00255 615 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 PSMD3O43242 534 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 SCRG1O75711 98 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 AGTP01019 485 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 CD48P09326 243 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 TACR2P21452 398 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 FPR1P21462 350 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 FOLR3P41439 243 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 MMP13P45452 471 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 ITGA8P53708 1063 aa6.41□□□□□ -1.38
CSTF3-201ENST00000323959 EIF3EP60228 445 aaKnown RBP6.41□□□□□ -1.38
CSTF3-201ENST00000323959 ARG2P78540 354 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms