RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SNAP47Q5SQN1 464 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 GDF6Q6KF10 455 aaPredicted RBP10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 FBXL22Q6P050 247 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 B3GALT6Q96L58 329 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 IKZF2Q9UKS7 526 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 STYXL1Q9Y6J8 313 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 PHRF1Q9P1Y6 1649 aaKnown RBP10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 HCRTO43612 131 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 TBX10O75333 385 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 KCNE1P15382 129 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 DNAJA1P31689 397 aaKnown RBP10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 KLHL22Q53GT1 634 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 ZNF311Q5JNZ3 666 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 FAM182AQ5T1J6 154 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 FRMD7Q6ZUT3 714 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 PRICKLE1Q96MT3 831 aaPredicted RBP10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 COPS4Q9BT78 406 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 USP29Q9HBJ7 922 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 SIX3O95343 332 aaPredicted RBP10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 IGFALSP35858 605 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 NCBP2P52298 156 aaKnown RBP eCLIP10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 SCN1BQ07699 218 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 BTN2A1Q7KYR7 527 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 ZCCHC10Q8TBK6 192 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 DERL2Q9GZP9 239 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 KCNN2Q9H2S1 579 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 EXO5Q9H790 373 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 FZD4Q9ULV1 537 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 EFCAB9A8MZ26 197 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 AREL1O15033 823 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 KDELR3O43731 214 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 PRKCGP05129 697 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 FCHO2Q0JRZ9 810 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 INCA1Q0VD86 236 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 OLIG2Q13516 323 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 PDCD4Q53EL6 469 aaKnown RBP10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 FAM91A1Q658Y4 838 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 POMZP3Q6PJE2 187 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 C2CD4AQ8NCU7 369 aaPredicted RBP10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 SLC22A17Q8WUG5 538 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 ART5Q96L15 291 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 RAB11FIP5Q9BXF6 653 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 RNF39Q9H2S5 420 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 CCSER2Q9H7U1 834 aa10.7□□□□□ -0.7
SNRNP200-201ENST00000323853 FAM240BA0A1B0GVZ2 78 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 ZNF487B1APH4 448 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 ENGP17813 658 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 GNAZP19086 355 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 DDX6P26196 483 aaKnown RBP eCLIP10.69□□□□□ -0.72e-11■□□□□ 9.9
SNRNP200-201ENST00000323853 HSD17B2P37059 387 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 RORCP51449 518 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 PRKCZQ05513 592 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 DUOXA1Q1HG43 343 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 SLC2A7Q6PXP3 512 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 GDPD4Q6W3E5 623 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 PRR23BQ6ZRT6 265 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 LCN9Q8WX39 176 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 CDKN2AIPNLQ96HQ2 116 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 PIWIL1Q96J94 861 aaKnown RBP10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 KCNC2Q96PR1 638 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 GALNT8Q9NY28 637 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 Q9Y3F1 56 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 PRPS1L1P21108 318 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 ACVRL1P37023 503 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 MXD1Q05195 221 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 FAAH2Q6GMR7 532 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 SLC30A6Q6NXT4 461 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 IGDCC3Q8IVU1 814 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 OR10G2Q8NGC3 310 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 TMBIM1Q969X1 311 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 PKP2Q99959 881 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 SLC29A3Q9BZD2 475 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 ZNF395Q9H8N7 513 aaPredicted RBP10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 FARSBQ9NSD9 589 aaKnown RBP10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 TARDBPQ13148 414 aaKnown RBP eCLIP10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 SPIN4Q56A73 249 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 TNFAIP8L3Q5GJ75 292 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 RBM20Q5T481 1227 aaKnown RBP10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 PLET1Q6UQ28 207 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 NAPRTQ6XQN6 538 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 MINDY2Q8NBR6 621 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 ZBED6CLQ96FA7 236 aaPredicted RBP10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 SLC35A5Q9BS91 424 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 CCM2Q9BSQ5 444 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 YTHDF1Q9BYJ9 559 aaKnown RBP10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 SLC32A1Q9H598 525 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 TMEM248Q9NWD8 314 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 TVP23BQ9NYZ1 205 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 A0A1W2PRB8 838 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 PRORSD1PA6NEY8 169 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 HAS3O00219 553 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 SRPRAP08240 638 aaKnown RBP10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 ATP4BP51164 291 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 MBOAT1Q6ZNC8 495 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 ERI1Q8IV48 349 aaKnown RBP10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 TP53INP1Q96A56 240 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 MTERF1Q99551 399 aaKnown RBP10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 SEZ6LQ9BYH1 1024 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 SUV39H2Q9H5I1 410 aa10.69□□□□□ -0.7
SNRNP200-201ENST00000323853 VARSP26640 1264 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms