RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 BRD9Q9H8M2 597 aa21.83■■□□□ 1.09
PNKP-201ENST00000322344 DNAJB9Q9UBS3 223 aa21.83■■□□□ 1.09
PNKP-201ENST00000322344 ZNHIT2Q9UHR6 403 aa21.83■■□□□ 1.09
PNKP-201ENST00000322344 ADGRE2Q9UHX3 823 aa21.83■■□□□ 1.09
PNKP-201ENST00000322344 MAN2B2Q9Y2E5 1009 aa21.83■■□□□ 1.09
PNKP-201ENST00000322344 NPIPB8E9PQR5 432 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 KPNA5O15131 536 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 BNIP3LO60238 219 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 PDYNP01213 254 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 CTSAP10619 480 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 CA8P35219 290 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 SLC6A12P48065 614 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 POLR2LP62875 67 aaKnown RBP21.82■■□□□ 1.08
PNKP-201ENST00000322344 CPSF6Q16630 551 aaKnown RBP eCLIP21.82■■□□□ 1.08
PNKP-201ENST00000322344 TBPL2Q6SJ96 375 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 KRTCAP2Q8N6L1 136 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 PNPT1Q8TCS8 783 aaKnown RBP21.82■■□□□ 1.08
PNKP-201ENST00000322344 ASB11Q8WXH4 323 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 SDCCAG3Q96C92 435 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 KCNH6Q9H252 994 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 ELOVL6Q9H5J4 265 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 RMND5AQ9H871 391 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 SLC25A37Q9NYZ2 338 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 INVSQ9Y283 1065 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 TMED5Q9Y3A6 229 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 KCNE1BA0A087WTH5 132 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 A0A096LPI6 279 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 FAM220BPB1ANY3 271 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 MTHFRP42898 656 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 BOP1Q14137 746 aaKnown RBP21.82■■□□□ 1.08
PNKP-201ENST00000322344 CCNYL2Q5T2Q4 361 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 LRIF1Q5T3J3 769 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 C1orf53Q5VUE5 145 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 TMEM214Q6NUQ4 689 aaKnown RBP21.82■■□□□ 1.08
PNKP-201ENST00000322344 DPY19L3Q6ZPD9 716 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 MICU2Q8IYU8 434 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 L3MBTL4Q8NA19 623 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 CMTM7Q96FZ5 175 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 SLC46A2Q9BY10 475 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 RNF208Q9H0X6 261 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 DDX18Q9NVP1 670 aaKnown RBP21.82■■□□□ 1.08
PNKP-201ENST00000322344 B4GALT6Q9UBX8 382 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 LIMD1Q9UGP4 676 aa21.82■■□□□ 1.08
PNKP-201ENST00000322344 SERTM1A2A2V5 107 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 CXCR6O00574 342 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 UGT2B4P06133 528 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 C8AP07357 584 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 RETP07949 1114 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 ATP1B2P14415 290 aaPredicted RBP21.81■■□□□ 1.08
PNKP-201ENST00000322344 ACPPP15309 386 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 CYP2A7P20853 494 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 PCSK6P29122 969 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 S100A3P33764 101 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 NRIP1P48552 1158 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 HNRNPFP52597 415 aaKnown RBP21.81■■□□□ 1.08
PNKP-201ENST00000322344 EPS8Q12929 822 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 LILRA6Q6PI73 481 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 NEK10Q6ZWH5 1172 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 OFCC1Q8IZS5 231 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 ZNF557Q8N988 423 aaPredicted RBP21.81■■□□□ 1.08
PNKP-201ENST00000322344 FAM162AQ96A26 154 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 PAIP1Q9H074 479 aaKnown RBP21.81■■□□□ 1.08
PNKP-201ENST00000322344 TMEM39AQ9NV64 488 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 LTBP2Q14767 1821 aa21.81■■□□□ 1.08
PNKP-201ENST00000322344 CLIC3O95833 236 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 ALPLP05186 524 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 THRBP10828 461 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 RPL10P27635 214 aaKnown RBP21.8■■□□□ 1.08
PNKP-201ENST00000322344 AP1S2P56377 157 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 HSPA14Q0VDF9 509 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 OTUD3Q5T2D3 398 aaPredicted RBP21.8■■□□□ 1.08
PNKP-201ENST00000322344 MSANTD1Q6ZTZ1 278 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 ZDHHC13Q8IUH4 622 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 SVOPLQ8N434 492 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 MTFMTQ96DP5 389 aaKnown RBP21.8■■□□□ 1.08
PNKP-201ENST00000322344 SLC47A1Q96FL8 570 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 ITCHQ96J02 903 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 IKZF5Q9H5V7 419 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 MAGIXQ9H6Y5 334 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 KAT8Q9H7Z6 458 aaKnown RBP21.8■■□□□ 1.08
PNKP-201ENST00000322344 ASAH2Q9NR71 780 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 C16orf96A6NNT2 1141 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 EFCAB14O75071 495 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 CCL5P13501 91 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 ZNF30P17039 623 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 GJA1P17302 382 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 RFLNAQ6ZTI6 216 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 PLPP6Q8IY26 295 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 CLEC4FQ8N1N0 589 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 TMEM132CQ8N3T6 1108 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 FBXO30Q8TB52 745 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 TESCQ96BS2 214 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 CPPED1Q9BRF8 314 aaPredicted RBP21.8■■□□□ 1.08
PNKP-201ENST00000322344 NPLQ9BXD5 320 aaPredicted RBP21.8■■□□□ 1.08
PNKP-201ENST00000322344 BRCA2P51587 3418 aa21.8■■□□□ 1.08
PNKP-201ENST00000322344 DENND4CQ5VZ89 1909 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 WASH3PC4AMC7 463 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 CFAP99D6REC4 459 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 GFYI3L273 518 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 CYP2A6P11509 494 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms