RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 EBPLQ9BY08 206 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ITPAQ9BY32 194 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ATP13A3Q9H7F0 1226 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 MIOSQ9NXC5 875 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ABCD2Q9UBJ2 740 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 A0A1B0GVM2 712 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 SNTNA6NMZ2 147 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 FAM155AB1AL88 458 aaPredicted RBP12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ANKRD66B4E2M5 251 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 CLIC1O00299 241 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 LDB2O43679 373 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 TMCC2O75069 709 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 SERPIND1P05546 499 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 CRHBPP24387 322 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 STARD3Q14849 445 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 UPP1Q16831 310 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 RAB41Q5JT25 222 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 C6orf183Q5T699 404 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ALKAL1Q6UXT8 129 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 PTCHD4Q6ZW05 846 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 OR13F1Q8NGS4 319 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 CHPT1Q8WUD6 406 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 LGALS12Q96DT0 336 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 DUS3LQ96G46 650 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 SH3YL1Q96HL8 342 aaPredicted RBP12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 TPK1Q9H3S4 243 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 DNAJC11Q9NVH1 559 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 PHIPQ8WWQ0 1821 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 LOC730098B7Z3J9 87 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 CATP04040 527 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 AGXTP21549 392 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 CORO1AP31146 461 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 TUBA1BP68363 451 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 PLD1Q13393 1074 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ZNF284Q2VY69 593 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 TPRG1LQ5T0D9 272 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 TUBA1AQ71U36 451 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 C11orf65Q8NCR3 313 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 WDR36Q8NI36 951 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 NPLOC4Q8TAT6 608 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 TNFRSF12AQ9NP84 129 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 TMLHEQ9NVH6 421 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 USP22Q9UPT9 525 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 KLHL20Q9Y2M5 609 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 TRIP11Q15643 1979 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ADAMDEC1O15204 470 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 RPS17P08708 135 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 SHMT2P34897 504 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 MAPK8P45983 427 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 RPL34P49207 117 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ERVPABLB-1P60509 514 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 USP45Q70EL2 814 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 CLDN19Q8N6F1 224 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 ATG10Q9H0Y0 220 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 TMEM245Q9H330 911 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 NECTIN3Q9NQS3 549 aa12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 PAK1IP1Q9NWT1 392 aaPredicted RBP12.48□□□□□ -0.41
DNMT3A-202ENST00000321117 WNK3Q9BYP7 1800 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 SYNDIG1LA6NDD5 238 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 CCDC182A6NF36 153 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 PURAQ00577 322 aaKnown RBP12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 OR4F3Q6IEY1 312 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 AGMOQ6ZNB7 445 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 ARMCX6Q7L4S7 300 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 EPHX4Q8IUS5 362 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 PCSK9Q8NBP7 692 aaKnown RBP12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 FRS2Q8WU20 508 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 SOCS4Q8WXH5 440 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 GPN2Q9H9Y4 310 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 H2AFY2Q9P0M6 372 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 EVLQ9UI08 416 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 CYP7B1O75881 506 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 MYL12AP19105 171 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 AZGP1P25311 298 aaKnown RBP12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 KCNQ1P51787 676 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 ABRAXAS2Q15018 415 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 PON2Q15165 354 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 USP41Q3LFD5 358 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 ANXA8L1Q5VT79 327 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 KIAA0319Q5VV43 1072 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 ATG9BQ674R7 924 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 BEND5Q7L4P6 421 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 RNF180Q86T96 592 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 LINC01465Q8N7H1 131 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 MAGEB10Q96LZ2 347 aaPredicted RBP12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 ENPP5Q9UJA9 477 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 B3GNT3Q9Y2A9 372 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 A0A0D9SEW6 157 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 MANBAO00462 879 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 TPD52L2O43399 206 aaKnown RBP12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 GSTM1P09488 218 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 TSPAN19P0C672 248 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 DCTP40126 519 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 CDH12P55289 794 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 NCS1P62166 190 aa12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 SMAD3P84022 425 aaKnown RBP12.47□□□□□ -0.41
DNMT3A-202ENST00000321117 CREB5Q02930 508 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms