RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 LETMD1Q6P1Q0 360 aa10.76□□□□□ -0.69
TOP3A-201ENST00000321105 NCEH1Q6PIU2 408 aa10.76□□□□□ -0.69
TOP3A-201ENST00000321105 ZNF557Q8N988 423 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-201ENST00000321105 ZCCHC10Q8TBK6 192 aa10.76□□□□□ -0.69
TOP3A-201ENST00000321105 ARMC5Q96C12 935 aa10.76□□□□□ -0.69
TOP3A-201ENST00000321105 SLC47A1Q96FL8 570 aa10.76□□□□□ -0.69
TOP3A-201ENST00000321105 FZD3Q9NPG1 666 aa10.76□□□□□ -0.69
TOP3A-201ENST00000321105 FNIP2Q9P278 1114 aa10.76□□□□□ -0.69
TOP3A-201ENST00000321105 FBXW2Q9UKT8 454 aa10.76□□□□□ -0.69
TOP3A-201ENST00000321105 PRSS21Q9Y6M0 314 aa10.76□□□□□ -0.69
TOP3A-201ENST00000321105 SPTA1P02549 2419 aa10.76□□□□□ -0.69
TOP3A-201ENST00000321105 APODP05090 189 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 HNRNPCP07910 306 aaKnown RBP eCLIP10.75□□□□□ -0.69
TOP3A-201ENST00000321105 EN2P19622 333 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-201ENST00000321105 FSHRP23945 695 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 IRS1P35568 1242 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 IST1P53990 364 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 BNIP2Q12982 314 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 ADGRE1Q14246 886 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 GTDC1Q4AE62 458 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 FRG2Q64ET8 278 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 AGTRAPQ6RW13 159 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 DEF8Q6ZN54 512 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 HID1Q8IV36 788 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 KCT2Q8NC54 265 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 NELL1Q92832 810 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 PLEKHG4BQ96PX9 1271 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 FRG2BQ96QU4 278 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 ZNF229Q9UJW7 825 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 TESMINQ9Y4I5 508 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 NUMBLQ9Y6R0 609 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 CNOT1A5YKK6 2376 aaKnown RBP10.75□□□□□ -0.69
TOP3A-201ENST00000321105 G3V2T6 193 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 HNRNPRO43390 633 aaKnown RBP10.75□□□□□ -0.69
TOP3A-201ENST00000321105 SERPINA1P01009 418 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 PGRP06401 933 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 NR2F1P10589 423 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 FDXRP22570 491 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 SH3BGRP55822 239 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-201ENST00000321105 ZXDBP98169 803 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 AMZ2Q86W34 360 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 KRT78Q8N1N4 520 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 LRCH3Q96II8 777 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 CGREF1Q99674 301 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 KLF16Q9BXK1 252 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-201ENST00000321105 NLNQ9BYT8 704 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 DPEP2Q9H4A9 486 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 SLC32A1Q9H598 525 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 SLAMF8Q9P0V8 285 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 TAC3Q9UHF0 121 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 NCOR1O75376 2440 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 DHCR24Q15392 516 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 LDLRAP1Q5SW96 308 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 PDE12Q6L8Q7 609 aaKnown RBP10.75□□□□□ -0.69
TOP3A-201ENST00000321105 C8orf59Q8N0T1 100 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-201ENST00000321105 C10orf53Q8N6V4 93 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 ANKLE1Q8NAG6 615 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 TRAPPC9Q96Q05 1148 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 HTATIP2Q9BUP3 242 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 GSTO2Q9H4Y5 243 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 LIN28AQ9H9Z2 209 aaKnown RBP10.75□□□□□ -0.69
TOP3A-201ENST00000321105 CCDC177Q9NQR7 707 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-201ENST00000321105 OGDHLQ9ULD0 1010 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 DUSP12Q9UNI6 340 aa10.75□□□□□ -0.69
TOP3A-201ENST00000321105 RTCAO00442 366 aaKnown RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 SGTAO43765 313 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 KLK1P06870 262 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 CTSAP10619 480 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 CAPN3P20807 821 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 SLC6A2P23975 617 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 VARSP26640 1264 aaKnown RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 ALDH4A1P30038 563 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 BUD31P41223 144 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 PRKCQQ04759 706 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 CES4AQ5XG92 561 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 ADCY4Q8NFM4 1077 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 CD200R1Q8TD46 325 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 MAGEC3Q8TD91 643 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 HMGB4Q8WW32 186 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 MAGEE1Q9HCI5 957 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 MKS1Q9NXB0 559 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 EP300Q09472 2414 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 WNK3Q9BYP7 1800 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 A0A1W2PP55 124 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 DRGXA6NNA5 263 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TMEM189-UBE2V1I3L0A0 370 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 ADRA1AP35348 466 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 ERVK-21P61565 698 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 RPS7P62081 194 aaKnown RBP10.74□□□□□ -0.69
TOP3A-201ENST00000321105 ELP6Q0PNE2 266 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 KCTD21Q4G0X4 260 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 GPAT3Q53EU6 434 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 ZNF542PQ5EBM4 170 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TMEM207Q6UWW9 146 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TCEAL8Q8IYN2 117 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 STX19Q8N4C7 294 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 SMYD1Q8NB12 490 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TMEM145Q8NBT3 493 aa10.74□□□□□ -0.69
TOP3A-201ENST00000321105 TIFAQ96CG3 184 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms