RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 AURKBQ96GD4 344 aaPredicted RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 NDC1Q9BTX1 674 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 RAI2Q9Y5P3 530 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 HEBP2Q9Y5Z4 205 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 TRIM64A6NGJ6 449 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 AQP12BA6NM10 295 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 MAFO75444 373 aaPredicted RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 E2F1Q01094 437 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 PRPF38BQ5VTL8 546 aaKnown RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 PLPPR4Q7Z2D5 763 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 AQP12AQ8IXF9 295 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 STON2Q8WXE9 905 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 TUBA1CQ9BQE3 449 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 CNTN6Q9UQ52 1028 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 CD72P21854 359 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 SLC1A2P43004 574 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 YAP1P46937 504 aaKnown RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 PAQR7Q86WK9 346 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 LINC00471Q8N535 108 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 ZNF700Q9H0M5 742 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 TBCCD1Q9NVR7 557 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 OAZ3Q9UMX2 235 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 SETD1AO15047 1707 aaKnown RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 CAND1Q86VP6 1230 aaKnown RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 NXPE1Q8N323 547 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 PLD5Q8N7P1 536 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 ZMIZ2Q8NF64 920 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 CPT1BQ92523 772 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 PFDN5Q99471 154 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 CHRAC1Q9NRG0 131 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 ADAMTS13Q76LX8 1427 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 CLDN5O00501 218 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 MAPK3P27361 379 aaPredicted RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 SMSP52788 366 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 ZNF420Q8TAQ5 688 aaPredicted RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 ASB12Q8WXK4 309 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 KLHL6Q8WZ60 621 aa16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 PHPT1Q9NRX4 125 aaPredicted RBP16.57■□□□□ 0.24
SMCHD1-201ENST00000320876 NEDD8-MDP1E9PL57 170 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 S100A16Q96FQ6 103 aaKnown RBP16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 C1orf109Q9NX04 203 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 SLC39A1Q9NY26 324 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 M0R233 179 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 ADH1AP07327 375 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 SMIM10L2AP0DMW4 78 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 SMIM10L2BP0DMW5 78 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 TAL1P17542 331 aaPredicted RBP16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 PUM1Q14671 1186 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 ASB18Q6ZVZ8 466 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 DHRS1Q96LJ7 313 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 PPM1BO75688 479 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 F8A1P23610 371 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 HSPA7P48741 367 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 CRISP3P54108 245 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 MTPNP58546 118 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 CRB2Q5IJ48 1285 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 SSX6Q7RTT6 188 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 FAM129CQ86XR2 697 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 ATP6V1C2Q8NEY4 427 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 KCNC2Q96PR1 638 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 KCNN3Q9UGI6 736 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 SCAMP3O14828 347 aaKnown RBP16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 HSD11B1P28845 292 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 GRIA1P42261 906 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 SLC35G5Q96KT7 338 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 HSPA12BQ96MM6 686 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 TMEM9Q9P0T7 183 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 CSN2P05814 226 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 HK1P19367 917 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 TNFSF9P41273 254 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 ERVK-8P63133 956 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 ALKBH2Q6NS38 261 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 SLC7A6OSQ96CW6 309 aaPredicted RBP16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 TMED9Q9BVK6 235 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 OR2B2Q9GZK3 357 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 FLRT1Q9NZU1 646 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 MRPS23Q9Y3D9 190 aaKnown RBP16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 C1orf167Q5SNV9 1468 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 LOC100130705A0A1B0GUX0 176 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 HMGN1P05114 100 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 GFOD2Q3B7J2 385 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 ALG1LQ6GMV1 187 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 MFSD1Q9H3U5 465 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 LRRC42Q9Y546 428 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 C1RP00736 705 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 CNTN2Q02246 1040 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 ILF3Q12906 894 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 AADACL4Q5VUY2 407 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 RHBDF1Q96CC6 855 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 ZNF558Q96NG5 402 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 TNFRSF10DQ9UBN6 386 aa16.56■□□□□ 0.24
SMCHD1-201ENST00000320876 COL1A2P08123 1366 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 CCNFP41002 786 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 NOMO2Q5JPE7 1267 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 GBA2Q9HCG7 927 aaPredicted RBP16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 TVP23BQ9NYZ1 205 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 CPA4Q9UI42 421 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 EPHX2P34913 555 aa16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 GANABQ14697 944 aaKnown RBP16.55■□□□□ 0.24
SMCHD1-201ENST00000320876 ASTE1Q2TB18 679 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms