RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 THG1LQ9NWX6 298 aaKnown RBP12.78□□□□□ -0.36
CPNE1-201ENST00000317677 MBD1Q9UIS9 605 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-201ENST00000317677 TRMT6Q9UJA5 497 aaKnown RBP12.78□□□□□ -0.36
CPNE1-201ENST00000317677 RABL2BQ9UNT1 228 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 SLC27A6Q9Y2P4 619 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 TRAF6Q9Y4K3 522 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 AKAP10O43572 662 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 KLHL41O60662 606 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 S100BP04271 92 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-201ENST00000317677 ENO2P09104 434 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-201ENST00000317677 TIMP2P16035 220 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 CHRM3P20309 590 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 ITGALP20701 1170 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 MYF6P23409 242 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 ADSLP30566 484 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-201ENST00000317677 SERPINB5P36952 375 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 VASPP50552 380 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-201ENST00000317677 THOP1P52888 689 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 HERVK_113P63132 956 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 B4GALNT1Q00973 533 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 PMS2P3Q13401 168 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 RAB39AQ14964 217 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 FBXO48Q5FWF7 155 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 GPR107Q5VW38 600 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 SEL1L3Q68CR1 1132 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 TANGO2Q6ICL3 276 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 CYHR1Q6ZMK1 362 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 NEK10Q6ZWH5 1172 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 CUZD1Q86UP6 607 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 STK40Q8N2I9 435 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 NXPE1Q8N323 547 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 KIAA1958Q8N8K9 716 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 MFSD2AQ8NA29 543 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 BHLHE22Q8NFJ8 381 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-201ENST00000317677 LINGO1Q96FE5 620 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 EGLN2Q96KS0 407 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 NSUN5Q96P11 429 aaKnown RBP12.78□□□□□ -0.36
CPNE1-201ENST00000317677 ERVK-6Q9BXR3 956 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 SARS2Q9NP81 518 aaKnown RBP12.78□□□□□ -0.36
CPNE1-201ENST00000317677 DHRS7Q9Y394 339 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 COMMD10Q9Y6G5 202 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 LRRK1Q38SD2 2015 aa12.78□□□□□ -0.36
CPNE1-201ENST00000317677 A0A1B0GTL3 188 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 RGSL1A5PLK6 1076 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 CLDN25C9JDP6 229 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 TMX2-CTNND1H3BSU7 103 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 SDHDO14521 159 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 SCO2O43819 266 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 NUAK1O60285 661 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 NOL3O60936 208 aaKnown RBP12.77□□□□□ -0.37
CPNE1-201ENST00000317677 BCL10O95999 233 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 ADH1CP00326 375 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 UBL4AP11441 157 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 ITGB6P18564 788 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 METAP1P53582 386 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 CDH13P55290 713 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 MS4A2Q01362 244 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 HYAL1Q12794 435 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 TUBA3CQ13748 450 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 PTK2BQ14289 1009 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 PFKFB4Q16877 469 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 ATP13A5Q4VNC0 1218 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 GALNT18Q6P9A2 607 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 VITQ6UXI7 678 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 PGAM4Q8N0Y7 254 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 NKAPQ8N5F7 415 aaKnown RBP12.77□□□□□ -0.37
CPNE1-201ENST00000317677 ANGPTL6Q8NI99 470 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 CHFRQ96EP1 664 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 ZNF486Q96H40 463 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-201ENST00000317677 MAELQ96JY0 434 aaKnown RBP12.77□□□□□ -0.37
CPNE1-201ENST00000317677 CDRT15Q96T59 188 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 PLA2G2FQ9BZM2 168 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 WDR12Q9GZL7 423 aaKnown RBP12.77□□□□□ -0.37
CPNE1-201ENST00000317677 ABCG8Q9H221 673 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 ZNF385DQ9H6B1 395 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 TCF7L2Q9NQB0 619 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 GTSE1Q9NYZ3 720 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 PCDHB1Q9Y5F3 818 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 BDP1A6H8Y1 2624 aa12.77□□□□□ -0.37
CPNE1-201ENST00000317677 SPTBN5Q9NRC6 3674 aaKnown RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 FAM172BPA6NC97 362 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 BTN3A1O00481 513 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 KLK8O60259 260 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 GUCY1B2O75343 617 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 GMNNO75496 209 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 SUPT7LO94864 414 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 SRPRAP08240 638 aaKnown RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 JUNBP17275 347 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 SPINT3P49223 89 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 HK2P52789 917 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 GALNT1Q10472 559 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 RALGDSQ12967 914 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 PUS10Q3MIT2 529 aaKnown RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 POM121L1PQ3SYA9 428 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 TMEM198Q66K66 360 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 TTC33Q6PID6 262 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-201ENST00000317677 HSD11B1LQ7Z5J1 315 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 ANKRD13BQ86YJ7 626 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 GALNT13Q8IUC8 556 aa12.76□□□□□ -0.37
CPNE1-201ENST00000317677 DSELQ8IZU8 1212 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms