RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 SUZ12Q15022 739 aaKnown RBP11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 FRG2Q64ET8 278 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 BTN2A1Q7KYR7 527 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 SERINC5Q86VE9 423 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 FBXO15Q8NCQ5 510 aaPredicted RBP11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 POF1BQ8WVV4 589 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 DGCR14Q96DF8 476 aaKnown RBP11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 TEPSINQ96N21 525 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 FRG2BQ96QU4 278 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 COQ7Q99807 217 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 VRTNQ9H8Y1 702 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 DZANK1Q9NVP4 752 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 TMEM248Q9NWD8 314 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 ATXN10Q9UBB4 475 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 GPC6Q9Y625 555 aaPredicted RBP11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 OAS3Q9Y6K5 1087 aaKnown RBP11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 AFDNP55196 1824 aaKnown RBP11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 PHLPP1O60346 1717 aa11.73□□□□□ -0.53
AMBRA1-201ENST00000314845 ZNF623O75123 536 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ECI2O75521 394 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ZBTB11O95625 1053 aaPredicted RBP11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 GALTP07902 379 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 PRKAR1AP10644 381 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 HOXB2P14652 356 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ARRB1P49407 418 aaPredicted RBP11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ZNF846Q147U1 533 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 TEAD2Q15562 447 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 AMZ1Q400G9 498 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 TMEM164Q5U3C3 297 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 NUP54Q7Z3B4 507 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ZNF483Q8TF39 744 aaPredicted RBP11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 LRRC3Q9BY71 257 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 SLC29A3Q9BZD2 475 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 CRTAC1Q9NQ79 661 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 MT-ND1P03886 318 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 NRIP1P48552 1158 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 CLCN7P51798 805 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 TMEM44Q2T9K0 475 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 SPIN4Q56A73 249 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ZCCHC12Q6PEW1 402 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ABHD13Q7L211 337 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ZC3HC1Q86WB0 502 aaKnown RBP11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 OR4C6Q8NH72 309 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 TFGQ92734 400 aaPredicted RBP11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 CMTM7Q96FZ5 175 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 SAMD11Q96NU1 681 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 TRNT1Q96Q11 434 aaKnown RBP11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 RAD9AQ99638 391 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 SNX7Q9UNH6 387 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 TESMINQ9Y4I5 508 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 C9J4A7 227 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 SLC30A4O14863 429 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 SSNA1O43805 119 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 PRAMEF11O60813 436 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 SHOX2O60902 331 aaPredicted RBP11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 GADD45GO95257 159 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 CLDN7O95471 211 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 AGR2O95994 175 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 PGDP52209 483 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 LY6G5CQ5SRR4 150 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 PERM1Q5SV97 790 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 PDCD10Q9BUL8 212 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 CREBZFQ9NS37 354 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 SPATA7Q9P0W8 599 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 DMTF1Q9Y222 760 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 FAM149AA5PLN7 773 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 A8MT66 165 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ZNF487B1APH4 448 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ABLIM1O14639 778 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 MTX2O75431 263 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 TCF4P15884 667 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 DHPSP49366 369 aaPredicted RBP11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 SLC5A9Q2M3M2 681 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 ZNF366Q8N895 744 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 KAT2AQ92830 837 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 C16orf70Q9BSU1 422 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 POLE3Q9NRF9 147 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 SPEF2Q9C093 1822 aa11.72□□□□□ -0.53
AMBRA1-201ENST00000314845 H3BNX3 289 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 DLDP09622 509 aaKnown RBP11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 CREB1P16220 341 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 IL12AP29459 219 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 CTSOP43234 321 aaPredicted RBP11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 NCBP2P52298 156 aaKnown RBP eCLIP11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 OGDHQ02218 1023 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 HERC3Q15034 1050 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 TNFAIP8L2Q6P589 184 aaPredicted RBP11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 RNF31Q96EP0 1072 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 CYP2S1Q96SQ9 504 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 KCNS3Q9BQ31 491 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 WDR12Q9GZL7 423 aaKnown RBP11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 DENND2DQ9H6A0 471 aaPredicted RBP11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 SLC2A4RGQ9NR83 387 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 CLCA3PQ9Y6N3 262 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 CHRNA1P02708 482 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 ALPPP05187 535 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 RAP2AP10114 183 aa11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 EFNA1P20827 205 aaPredicted RBP11.71□□□□□ -0.53
AMBRA1-201ENST00000314845 PRKCHP24723 683 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms