RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ITM2CQ9NQX7 267 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 MAB21L2Q9Y586 359 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 AKAP12Q02952 1782 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 CTPS1P17812 591 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 NXPE1Q8N323 547 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 IPPKQ9H8X2 491 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 KCNMB3Q9NPA1 279 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 MRPS17Q9Y2R5 130 aaKnown RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 FAM174BQ3ZCQ3 159 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 ART5Q96L15 291 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 BLOC1S4Q9NUP1 217 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 FLRT1Q9NZU1 646 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 CPA4Q9UI42 421 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 UGT2B4P06133 528 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 UGT2B10P36537 528 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 INTS6LQ5JSJ4 861 aaKnown RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 C12orf43Q96C57 262 aaKnown RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 LRRC46Q96FV0 321 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 TREM1Q9NP99 234 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 UBR1Q8IWV7 1749 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 RCBTB2O95199 551 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 POP4O95707 220 aaKnown RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 NCK1P16333 377 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 HSPB3Q12988 150 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 MAD2L1BPQ15013 274 aaPredicted RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 GTPBP3Q969Y2 492 aaKnown RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 HSPA12BQ96MM6 686 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 TMEM184CQ9NVA4 438 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 LGALS13Q9UHV8 139 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 RAI2Q9Y5P3 530 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 C2orf71A6NGG8 1288 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 MAFO75444 373 aaPredicted RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 RPL10P27635 214 aaKnown RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 PBX3P40426 434 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 RFTN1Q14699 578 aaPredicted RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 ZNF676Q8N7Q3 588 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 SCGB1C1Q8TD33 95 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 KLHL6Q8WZ60 621 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 LPGAT1Q92604 370 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 BORCS8Q96FH0 119 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 RNF121Q9H920 327 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 CUEDC1Q9NWM3 386 aaPredicted RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 EML1O00423 815 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 AZGP1P25311 298 aaKnown RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 LIMK2P53671 638 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 C1QTNF8P60827 252 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 TAF1AQ15573 450 aaPredicted RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 MINDY4Q4G0A6 757 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 SPIN3Q5JUX0 258 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 C3orf33Q6P1S2 294 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 RASGEF1CQ8N431 466 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 LIX1Q8N485 282 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 TBL1XR1Q9BZK7 514 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 SLCO1B3Q9NPD5 702 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 LMO7Q8WWI1 1683 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 ASXL3Q9C0F0 2248 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 TRIM64BA6NI03 449 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 PTP4A2Q12974 167 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 HSD17B12Q53GQ0 312 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 C10orf62Q5T681 223 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 UNQ6126/PRO20091Q6UXV3 157 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 RALGPS2Q86X27 583 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 C2orf15Q8WU43 125 aaKnown RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 TMEM150CB9EJG8 249 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 PSMD9O00233 223 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 PCDHGA12O60330 932 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 CDH1P12830 882 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 TSPAN8P19075 237 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 SLC38A3Q99624 504 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 CHIAQ9BZP6 476 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 NMUR2Q9GZQ4 415 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 MRPS30Q9NP92 439 aaKnown RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 TBCCD1Q9NVR7 557 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 REXO2Q9Y3B8 237 aaKnown RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 NPPAP01160 153 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 RHOQP17081 205 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 ERVK-21P61565 698 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 HERV-K104P61576 105 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 GNMTQ14749 295 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 DCDC5Q6ZRR9 648 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 CEP97Q8IW35 865 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 CFAP206Q8IYR0 622 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 MAFFQ9ULX9 164 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 CLCA1A8K7I4 914 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 KCNQ2O43526 872 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 OR1F1O43749 312 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 RFX5P48382 616 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 MC1RQ01726 317 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 BNIP1Q12981 228 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 BLMHQ13867 455 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 GRK1Q15835 563 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 PDSS1Q5T2R2 415 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 CSPG4P5Q96PW8 444 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 CRTAC1Q9NQ79 661 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 DEC1Q9P2X7 70 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 TNFRSF10DQ9UBN6 386 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 FARSAQ9Y285 508 aaKnown RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 BORCS7-ASMTA0A0B4J1R7 106 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 PAPSS1O43252 624 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 GNAO1P09471 354 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms