RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 TPRG1LQ5T0D9 272 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 CERCAMQ5T4B2 595 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 ADNP2Q6IQ32 1131 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 TMEM53Q6P2H8 277 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS41-202ENST00000310301 BEND5Q7L4P6 421 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 NETO2Q8NC67 525 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 CEP76Q8TAP6 659 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 ATOH1Q92858 354 aaPredicted RBP8.04□□□□□ -1.12
VPS41-202ENST00000310301 ATP13A3Q9H7F0 1226 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 TBCCD1Q9NVR7 557 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 SUCOQ9UBS9 1254 aaKnown RBP8.04□□□□□ -1.12
VPS41-202ENST00000310301 ZNF69Q9UC07 566 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 DNAJB4Q9UDY4 337 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 TIMM22Q9Y584 194 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 A0A1W2PRU2 124 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 RSL1D1O76021 490 aaKnown RBP8.04□□□□□ -1.12
VPS41-202ENST00000310301 PIRTP0C851 137 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 PBX1P40424 430 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 CCR10P46092 362 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 BLKP51451 505 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 MANFP55145 182 aaKnown RBP8.04□□□□□ -1.12
VPS41-202ENST00000310301 ACTR3P61158 418 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 OGFRL1Q5TC84 451 aaPredicted RBP8.04□□□□□ -1.12
VPS41-202ENST00000310301 SLC37A3Q8NCC5 494 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 OR4L1Q8NH43 312 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 C10orf82Q8WW14 230 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 MYLIPQ8WY64 445 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 BTN2A3PQ96KV6 586 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 ZYG11BQ9C0D3 744 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 LIN28AQ9H9Z2 209 aaKnown RBP8.04□□□□□ -1.12
VPS41-202ENST00000310301 XPNPEP1Q9NQW7 623 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 EDARQ9UNE0 448 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 MYH14Q7Z406 1995 aaKnown RBP8.04□□□□□ -1.12
VPS41-202ENST00000310301 MYH2Q9UKX2 1941 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 ILVBLA1L0T0 632 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 EI24O14681 340 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 NOMO3P69849 1222 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 BTBD16Q32M84 506 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 DCST1Q5T197 706 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 RNASEH2BQ5TBB1 312 aaKnown RBP8.04□□□□□ -1.12
VPS41-202ENST00000310301 FRRS1Q6ZNA5 592 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 CHST9Q7L1S5 443 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 SH3RF2Q8TEC5 729 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 SNX33Q8WV41 574 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 SMARCD2Q92925 531 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 GPER1Q99527 375 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 ZDHHC6Q9H6R6 413 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 SSU72Q9NP77 194 aaKnown RBP8.04□□□□□ -1.12
VPS41-202ENST00000310301 CNTN3Q9P232 1028 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 TESMINQ9Y4I5 508 aa8.04□□□□□ -1.12
VPS41-202ENST00000310301 GRIN2DO15399 1336 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 TCRBV7S2A1N4TA0A589 114 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 MBLAC1A4D2B0 266 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 SH3D21A4FU49 640 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 C5orf51A6NDU8 294 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 A8MV72 311 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 NOL4O94818 638 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 SCELO95171 688 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 CDH5P33151 784 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 ARRB1P49407 418 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 CDH12P55289 794 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 TXNL4AP83876 142 aaKnown RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 ABRQ12979 859 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 ZBTB6Q15916 424 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 MOGQ16653 247 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 COLGALT2Q8IYK4 626 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 INO80EQ8NBZ0 244 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 MSANTD3Q96H12 275 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 LRTM1Q9HBL6 345 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 IFT46Q9NQC8 304 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 GDE1Q9NZC3 331 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 SEC14L3Q9UDX4 400 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 OR10H1Q9Y4A9 318 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 FKBP7Q9Y680 259 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 C5orf60A6NFR6 353 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 C9IYK1 514 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 DNAJA2O60884 412 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 CCNB2O95067 398 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 DBIP07108 87 aaKnown RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 OR4Q2P0C623 313 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 AKT2P31751 481 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 GRK5P34947 590 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 ACADVLP49748 655 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 AIF1P55008 147 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 DLG1Q12959 904 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 NPTX1Q15818 432 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 ZNF829Q3KNS6 432 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 GCNT6Q5T4J0 391 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 CYP4V2Q6ZWL3 525 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 CACUL1Q86Y37 369 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 ARL14EPQ8N8R7 260 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 OR2L5Q8NG80 312 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 OVCA2Q8WZ82 227 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 DCSTAMPQ9H295 470 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 PPM1HQ9ULR3 514 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 FXYD6-FXYD2A0A087WZ82 144 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 KLHL33A6NCF5 533 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 MCIDASD6RGH6 385 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 PFKLP17858 780 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms