RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 L3MBTL4Q8NA19 623 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 PROKR1Q8TCW9 393 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 COX14Q96I36 57 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 RSRC1Q96IZ7 334 aaKnown RBP20.71■□□□□ 0.91
ATG4D-201ENST00000309469 HOPXQ9BPY8 73 aaPredicted RBP20.71■□□□□ 0.91
ATG4D-201ENST00000309469 GPATCH1Q9BRR8 931 aaKnown RBP20.71■□□□□ 0.91
ATG4D-201ENST00000309469 BCAP29Q9UHQ4 241 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 LRRK1Q38SD2 2015 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 KCNE1BA0A087WTH5 132 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 C17orf113A0A1B0GUU1 675 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 FAM234BA2RU67 622 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 ANHXE9PGG2 379 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 IL12AP29459 219 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 BDKRB1P46663 353 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 HMGCS1Q01581 520 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 IMPG1Q17R60 797 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 TLDC1Q6P9B6 456 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 AGTRAPQ6RW13 159 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 CYP20A1Q6UW02 462 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 RGL4Q8IZJ4 473 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 MTFMTQ96DP5 389 aaKnown RBP20.7■□□□□ 0.91
ATG4D-201ENST00000309469 ZNF570Q96NI8 536 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 PKP4Q99569 1192 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 GID8Q9NWU2 228 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 STOX2Q9P2F5 926 aaPredicted RBP20.7■□□□□ 0.91
ATG4D-201ENST00000309469 SERGEFQ9UGK8 458 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 SNX6Q9UNH7 406 aa20.7■□□□□ 0.91
ATG4D-201ENST00000309469 DENND4AQ7Z401 1863 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 A0A1W2PP55 124 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 CCDC154A6NI56 674 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 ACOT8O14734 319 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 NVLO15381 856 aaKnown RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 BCAS2O75934 225 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 TCN1P20061 433 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 GNPDA1P46926 289 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 RPS14P62263 151 aaKnown RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 RPL38P63173 70 aaKnown RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 MAD2L1Q13257 205 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 MUM1Q2TAK8 710 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 ZNF776Q68DI1 518 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 XKR5Q6UX68 686 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 THOC6Q86W42 341 aaKnown RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 MINDY1Q8N5J2 469 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 FAM156AQ8NDB6 213 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 VPS33AQ96AX1 596 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 LRCH3Q96II8 777 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 MAGEB10Q96LZ2 347 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 SLC39A3Q9BRY0 314 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 IL1RL2Q9HB29 575 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 NMRK1Q9NWW6 199 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 SUCOQ9UBS9 1254 aaKnown RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 CD300AQ9UGN4 299 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 EIF3LQ9Y262 564 aaKnown RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 TMEM98Q9Y2Y6 226 aa20.7■□□□□ 0.9
ATG4D-201ENST00000309469 POLR3HQ9Y535 204 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-201ENST00000309469 PRAMEF4O60810 478 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 PDYNP01213 254 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 PCCBP05166 539 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 CCR3P51677 355 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 PRKG2Q13237 762 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 WSCD2Q2TBF2 565 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 SAMD4BQ5PRF9 694 aaKnown RBP20.69■□□□□ 0.9
ATG4D-201ENST00000309469 PRAMEF9Q5VWM5 478 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 PRMT9Q6P2P2 845 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 CRTC3Q6UUV7 619 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 KLHDC8AQ8IYD2 350 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 PPFIBP2Q8ND30 876 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 OR2T3Q8NH03 318 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 OR2L2Q8NH16 312 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 NECTIN4Q96NY8 510 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 ACTL8Q9H568 366 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 ELOVL6Q9H5J4 265 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 LRTM1Q9HBL6 345 aa20.69■□□□□ 0.9
ATG4D-201ENST00000309469 INTS7Q9NVH2 962 aaKnown RBP20.69■□□□□ 0.9
ATG4D-201ENST00000309469 ASPDHA6ND91 283 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 PRORSD1PA6NEY8 169 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 ANKRD28O15084 1053 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 EEDO75530 441 aaKnown RBP20.68■□□□□ 0.9
ATG4D-201ENST00000309469 RNASEH2AO75792 299 aaKnown RBP20.68■□□□□ 0.9
ATG4D-201ENST00000309469 C1orf105O95561 183 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 NTSR1P30989 418 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 SLC7A2P52569 658 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 PLOD1Q02809 727 aaPredicted RBP20.68■□□□□ 0.9
ATG4D-201ENST00000309469 NAE1Q13564 534 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 TRIM25Q14258 630 aaKnown RBP20.68■□□□□ 0.9
ATG4D-201ENST00000309469 AAK1Q2M2I8 961 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 SLC44A4Q53GD3 710 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 HABP4Q5JVS0 413 aaKnown RBP20.68■□□□□ 0.9
ATG4D-201ENST00000309469 KIAA1211LQ6NV74 962 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 HEATR4Q86WZ0 1026 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 ZFAND4Q86XD8 727 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 FBXO15Q8NCQ5 510 aaPredicted RBP20.68■□□□□ 0.9
ATG4D-201ENST00000309469 SELENOMQ8WWX9 145 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 ASB9Q96DX5 294 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 CIDEBQ9UHD4 219 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 MGAT4DA6NG13 374 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 MAP3K7O43318 606 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 SEC22BO75396 215 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 HALP42357 657 aa20.68■□□□□ 0.9
ATG4D-201ENST00000309469 CHIT1Q13231 466 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms