RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 PMS2P1A4D2B8 440 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 BTN3A3O00478 584 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 KIF1CO43896 1103 aaKnown RBP19.2■□□□□ 0.66
VEGFB-201ENST00000309422 C1orf105O95561 183 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 SYF2O95926 243 aaKnown RBP19.2■□□□□ 0.66
VEGFB-201ENST00000309422 AHSGP02765 367 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 LIPCP11150 499 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 SAT1P21673 171 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 MCM3P25205 808 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 PRDX3P30048 256 aaKnown RBP19.2■□□□□ 0.66
VEGFB-201ENST00000309422 SSTR1P30872 391 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 HSD17B2P37059 387 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 EIF2S3P41091 472 aaKnown RBP19.2■□□□□ 0.66
VEGFB-201ENST00000309422 ETV5P41161 510 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 KPNA2P52292 529 aaKnown RBP19.2■□□□□ 0.66
VEGFB-201ENST00000309422 PPP1CAP62136 330 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 NAA25Q14CX7 972 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 KYNUQ16719 465 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 HECTD2Q5U5R9 776 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 ANKS6Q68DC2 871 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 ZNF549Q6P9A3 640 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 SPESP1Q6UW49 350 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 ZDHHC24Q6UX98 284 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 BPHLQ86WA6 291 aaPredicted RBP19.2■□□□□ 0.66
VEGFB-201ENST00000309422 PPP1R3BQ86XI6 285 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 CD200R1Q8TD46 325 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 TSPAN17Q96FV3 270 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 SYTL2Q9HCH5 934 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 MOCS1Q9NZB8 636 aa19.2■□□□□ 0.66
VEGFB-201ENST00000309422 RUVBL2Q9Y230 463 aaKnown RBP19.2■□□□□ 0.66
VEGFB-201ENST00000309422 IGHV5-51A0A0C4DH38 117 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 TCRBV9S1A1TA0A576 114 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 SRRM3A6NNA2 597 aaPredicted RBP19.19■□□□□ 0.66
VEGFB-201ENST00000309422 KLK10O43240 276 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 TLX3O43711 291 aaPredicted RBP19.19■□□□□ 0.66
VEGFB-201ENST00000309422 CD9P21926 228 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 IL2P60568 153 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 SP140Q13342 867 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 NAB1Q13506 487 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 GBX1Q14549 363 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 OR2L8Q8NGY9 312 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 SEC14L1Q92503 715 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 CPNE1Q99829 537 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 SLC7A5P2Q9GIP4 190 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 RHOJQ9H4E5 214 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 SLC17A6Q9P2U8 582 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 ACSL6Q9UKU0 697 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 VWA7Q9Y334 891 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 NFS1Q9Y697 457 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 ACACBO00763 2458 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 A0A0J9YY10 115 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 FAM95CA0A1B0GW59 222 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 C9orf172C9J069 976 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 FKBP9O95302 570 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 MATN4O95460 622 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 C8GP07360 202 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 HIST1H2AGP0C0S8 130 aaPredicted RBP19.19■□□□□ 0.66
VEGFB-201ENST00000309422 UGT2B7P16662 529 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 HIST1H2ADP20671 130 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 UBE2R2Q712K3 238 aaPredicted RBP19.19■□□□□ 0.66
VEGFB-201ENST00000309422 TAX1BP1Q86VP1 789 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 ADGRF3Q8IZF5 1079 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 BMPERQ8N8U9 685 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 OR9A1PQ8NGU1 263 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 LINGO1Q96FE5 620 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 SLC41A2Q96JW4 573 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 HIST1H2AHQ96KK5 128 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 HIST1H2AJQ99878 128 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 CTRCQ99895 268 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 H2AFJQ9BTM1 129 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 TRIM54Q9BYV2 358 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 IRAK4Q9NWZ3 460 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 B3GALT1Q9Y5Z6 326 aa19.19■□□□□ 0.66
VEGFB-201ENST00000309422 COL27A1Q8IZC6 1860 aaPredicted RBP19.18■□□□□ 0.66
VEGFB-201ENST00000309422 KNTC1P50748 2209 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 A0A087WV48 116 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 PSIP1O75475 530 aaKnown RBP19.18■□□□□ 0.66
VEGFB-201ENST00000309422 CCNDBP1O95273 360 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 CAPNS1P04632 268 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 GP5P40197 560 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 TUBB4BP68371 445 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 TSTA3Q13630 321 aaPredicted RBP19.18■□□□□ 0.66
VEGFB-201ENST00000309422 SF1Q15637 639 aaKnown RBP19.18■□□□□ 0.66
VEGFB-201ENST00000309422 SLC5A12Q1EHB4 618 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 MANEAQ5SRI9 462 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 RBM20Q5T481 1227 aaKnown RBP19.18■□□□□ 0.66
VEGFB-201ENST00000309422 CYS1Q717R9 158 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 IL22RA1Q8N6P7 574 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 OR8K5Q8NH50 307 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 GIMAP7Q8NHV1 300 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 MCOLN3Q8TDD5 553 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 KIAA1143Q96AT1 154 aaPredicted RBP19.18■□□□□ 0.66
VEGFB-201ENST00000309422 ULBP3Q9BZM4 244 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 SIDT1Q9NXL6 827 aaKnown RBP19.18■□□□□ 0.66
VEGFB-201ENST00000309422 FOXJ2Q9P0K8 574 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 SEMA5BQ9P283 1151 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 CIDEBQ9UHD4 219 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 BTRCQ9Y297 605 aa19.18■□□□□ 0.66
VEGFB-201ENST00000309422 CHD8Q9HCK8 2581 aa19.17■□□□□ 0.66
VEGFB-201ENST00000309422 UNC13CQ8NB66 2214 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms