RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 STEAP3Q658P3 488 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 DESI1Q6ICB0 168 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 CYP4Z1Q86W10 505 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 OR8H2Q8N162 312 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 BARD1Q99728 777 aaKnown RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 ACOT13Q9NPJ3 140 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 SCUBE2Q9NQ36 999 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 WDR70Q9NW82 654 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 NUDT4Q9NZJ9 180 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 MARCH2Q9P0N8 246 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 TLR6Q9Y2C9 796 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 NUAK1O60285 661 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 IDH2P48735 452 aaKnown RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 TYSND1Q2T9J0 566 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 SPANXN2Q5MJ10 180 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 AFMIDQ63HM1 303 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 OR2T5Q6IEZ7 315 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 GPR153Q6NV75 609 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 ADAMTSL2Q86TH1 951 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 MON1AQ86VX9 555 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 LYSMD2Q8IV50 215 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 FAM83FQ8NEG4 500 aaPredicted RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 OR2T29Q8NH02 315 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 SLC10A4Q96EP9 437 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 CCDC115Q96NT0 180 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 ZNF300Q96RE9 604 aaPredicted RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 BCL7BQ9BQE9 202 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 COPS4Q9BT78 406 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 REEP1Q9H902 201 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 OSER1Q9NX31 292 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 IFT52Q9Y366 437 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 ILVBLA1L0T0 632 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 GRXCR2A6NFK2 248 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 RGS5O15539 181 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 IL6P05231 212 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 RPL9P32969 192 aaKnown RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 EIF2DP41214 584 aaKnown RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 SLC35A2P78381 396 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 SERINC3Q13530 473 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 ARHGEF7Q14155 803 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 DOK6Q6PKX4 331 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 CCBE1Q6UXH8 406 aaPredicted RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 NEK10Q6ZWH5 1172 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 ATL1Q8WXF7 558 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 FBXO32Q969P5 355 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 CHCHD6Q9BRQ6 235 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 NUAK2Q9H093 628 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 NLE1Q9NVX2 485 aaPredicted RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 IL37Q9NZH6 218 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 DNMT3BQ9UBC3 853 aaKnown RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 KLHL3Q9UH77 587 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 TMEFF2Q9UIK5 374 aaPredicted RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 CAB39Q9Y376 341 aaPredicted RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 TANC1Q9C0D5 1861 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 POLR2AP24928 1970 aaKnown RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 MBLAC1A4D2B0 266 aaPredicted RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 SLC16A6O15403 523 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 FFAR2O15552 330 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 GRK4P32298 578 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 RGS4P49798 205 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 FCGRTP55899 365 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 DMC1Q14565 340 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 UPP1Q16831 310 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 PARP15Q460N3 678 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 FAM171BQ6P995 826 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 CEP68Q76N32 757 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 CD200R1Q8TD46 325 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 ZNF486Q96H40 463 aaPredicted RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 ITPAQ9BY32 194 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 EXOSC4Q9NPD3 245 aaKnown RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 SLC25A37Q9NYZ2 338 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 KIAA1522Q9P206 1035 aaPredicted RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 ABCG2Q9UNQ0 655 aa10.91□□□□□ -0.66
PTPN7-201ENST00000309017 SAMD4AQ9UPU9 718 aaKnown RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 LAMA2P24043 3122 aaKnown RBP10.91□□□□□ -0.66
PTPN7-201ENST00000309017 A0A0D9SEW6 157 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 CBX4O00257 560 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 PDHXO00330 501 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 MVKQ03426 396 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 TIGD6Q17RP2 521 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 SYT6Q5T7P8 510 aaPredicted RBP10.9□□□□□ -0.66
PTPN7-201ENST00000309017 ANGPTL8Q6UXH0 198 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 PEX13Q92968 403 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 RHBDF1Q96CC6 855 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 YIPF6Q96EC8 236 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 C1orf74Q96LT6 269 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 GPR63Q9BZJ6 419 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 SLIRPQ9GZT3 109 aaKnown RBP10.9□□□□□ -0.66
PTPN7-201ENST00000309017 MMP27Q9H306 513 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 SP140LQ9H930 580 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 MOV10Q9HCE1 1003 aaKnown RBP10.9□□□□□ -0.66
PTPN7-201ENST00000309017 VNN3Q9NY84 501 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 VPS4AQ9UN37 437 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 MED16Q9Y2X0 877 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 ISPDA4D126 451 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 PABPN1LA6NDY0 278 aaKnown RBP10.9□□□□□ -0.66
PTPN7-201ENST00000309017 F8W810 466 aa10.9□□□□□ -0.66
PTPN7-201ENST00000309017 RFXANKO14593 260 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms