RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 SLC9A6Q92581 669 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 NOP53Q9NZM5 478 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 NPIPB15A6NHN6 443 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 CDK4P11802 303 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 KIR3DL1P43629 444 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 INPP1P49441 399 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 NUP107P57740 925 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 FGL2Q14314 439 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 DEFB133Q30KQ1 61 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 LRRC70Q7Z2Q7 622 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 THOC6Q86W42 341 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 NUDT13Q86X67 352 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 TRPV3Q8NET8 790 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 KCNV2Q8TDN2 545 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 SLC13A3Q8WWT9 602 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 C19orf60Q96EN9 201 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 ACSS2Q9NR19 701 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 PPM1HQ9ULR3 514 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 SLC22A3O75751 556 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 HIST1H2ABP04908 130 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 SNRPB2P08579 225 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 PPIBP23284 216 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 CNR2P34972 360 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 FGD3Q5JSP0 725 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 ZNF549Q6P9A3 640 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 MBOAT1Q6ZNC8 495 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 HIST3H2AQ7L7L0 130 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 HIST1H2ACQ93077 130 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 PRRG3Q9BZD7 231 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 SUCOQ9UBS9 1254 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 C19orf25Q9UFG5 118 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 ADGRE2Q9UHX3 823 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 HS3ST2Q9Y278 367 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 ATXN2Q99700 1313 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 A0A1B0GTW7 788 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 OR1I1O60431 355 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 B4GALT3O60512 393 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 PLIN3O60664 434 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 KERAO60938 352 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 ZNF23P17027 643 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 ATP6V1B2P21281 511 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 MPSTP25325 297 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 P2RY2P41231 377 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 CSNK1EP49674 416 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 ARHGAP8P85298 464 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 TBL3Q12788 808 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 KLF1Q13351 362 aaPredicted RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 C16orf72Q14CZ0 275 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 FAM98BQ52LJ0 330 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 RBM20Q5T481 1227 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 SUSD1Q6UWL2 747 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 GCNT7Q6ZNI0 430 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 FGF14Q92915 247 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 RGMAQ96B86 450 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 HHATLQ9HCP6 504 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 PNO1Q9NRX1 252 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 ARMCX1Q9P291 453 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 KNL1Q8NG31 2342 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 MBTPS2O43462 519 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 KRT33AO76009 404 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 MYCLP1P12525 358 aaPredicted RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 CSNK1DP48730 415 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 AFF3P51826 1226 aaKnown RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 PTCHD3Q3KNS1 767 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 NEK5Q6P3R8 708 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 P3H2Q8IVL5 708 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 OR6C4Q8NGE1 309 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 KRT84Q9NSB2 600 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 WARS2Q9UGM6 360 aaKnown RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 MMP17Q9ULZ9 603 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 RUVBL1Q9Y265 456 aaKnown RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 POLR1DQ9Y2S0 133 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 PCDHGA2Q9Y5H1 932 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 SERPINB7O75635 380 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 TIMP2P16035 220 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 JAK1P23458 1154 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 IGFALSP35858 605 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 RXRGP48443 463 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 ARF5P84085 180 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 TFF2Q03403 129 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 GSTA3Q16772 222 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 TBC1D25Q3MII6 688 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 ARL13AQ5H913 290 aaPredicted RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 CLEC6AQ6EIG7 209 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 LIPIQ6XZB0 460 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 SPATA19Q7Z5L4 167 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 AMIGO1Q86WK6 493 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 ADCY4Q8NFM4 1077 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 SLC5A11Q8WWX8 675 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 NAT6Q93015 286 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 CMTM7Q96FZ5 175 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 SIGLEC10Q96LC7 697 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 JSRP1Q96MG2 331 aaPredicted RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 RARRES3Q9UL19 164 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 CHURC1-FNTBB4DL54 471 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 CDC7O00311 574 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 SLC28A2O43868 658 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 TGFB1P01137 390 aa9.04□□□□□ -0.96
PTPRE-202ENST00000306042 F7P08709 466 aaPredicted RBP9.04□□□□□ -0.96
PTPRE-202ENST00000306042 FNTBP49356 437 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms