RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 NDRG2Q9UN36 371 aaKnown RBP10.21□□□□□ -0.77
CLIP1-201ENST00000302528 MDFIC2A0A1B0GVS7 189 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 EFCAB9A8MZ26 197 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 HCKP08631 526 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 MSR1P21757 451 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 AIF1P55008 147 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 CD47Q08722 323 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 IQCCQ4KMZ1 466 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 TMEM119Q4V9L6 283 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 HMBOX1Q6NT76 420 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 XKRXQ6PP77 449 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 CERS6Q6ZMG9 384 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 DCAKDQ8WVC6 231 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 PWWP2AQ96N64 755 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 PNO1Q9NRX1 252 aaKnown RBP10.21□□□□□ -0.78
CLIP1-201ENST00000302528 POLR3BQ9NW08 1133 aaPredicted RBP10.21□□□□□ -0.78
CLIP1-201ENST00000302528 A0A0J9YVX5 310 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 I3L521 148 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 ADAMTS3O15072 1205 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 C1RP00736 705 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 COL6A2P12110 1019 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 PLA2G16P53816 162 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 BNIP1Q12981 228 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 LRP8Q14114 963 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.21□□□□□ -0.783e-6■■■■■ 26.9
CLIP1-201ENST00000302528 PARP15Q460N3 678 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 KCTD9Q7L273 389 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 DCBLD1Q8N8Z6 715 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 OR10A6Q8NH74 314 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF347Q96SE7 839 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 PCDHB18PQ96TA0 734 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 DPYSL5Q9BPU6 564 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 TTYH2Q9BSA4 534 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 PADI2Q9Y2J8 665 aa10.21□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF99A8MXY4 864 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SCAMP1O15126 338 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 RPP14O95059 124 aaKnown RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CRISP3P54108 245 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CLCQ05315 142 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CLEC6AQ6EIG7 209 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 PGAM4Q8N0Y7 254 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 GALNT11Q8NCW6 608 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 KLHL6Q8WZ60 621 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 FUZQ9BT04 418 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 AGXT2Q9BYV1 514 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 PCBD2Q9H0N5 130 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 POLR2J3Q9H1A7 115 aaKnown RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 PRELID1Q9Y255 219 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 NT5C1B-RDH14C9J2C7 533 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CXCR6O00574 342 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 MUSKO15146 869 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SCGB2A1O75556 95 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 DNAJA1P31689 397 aaKnown RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CLCN4P51793 760 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 C1QTNF8P60827 252 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 RNF220Q5VTB9 566 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 YIPF7Q8N8F6 280 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 GRHL3Q8TE85 626 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 KCTD7Q96MP8 289 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF649Q9BS31 505 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 ZDHHC4Q9NPG8 344 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 TMEM184CQ9NVA4 438 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 PRPS2P11908 318 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 EPCAMP16422 314 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF12P17014 697 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CD52P31358 61 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 UGT1A3P35503 534 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 TMEM164Q5U3C3 297 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 HID1Q8IV36 788 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF527Q8NB42 609 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SPATA22Q8NHS9 363 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SCGB1C1Q8TD33 95 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 ZBED6CLQ96FA7 236 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 BTN2A3PQ96KV6 586 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 DUSP16Q9BY84 665 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SLC28A3Q9HAS3 691 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 ADAP2Q9NPF8 381 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 ACP6Q9NPH0 428 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 DNAJC28Q9NX36 388 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 POLLQ9UGP5 575 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 HTR3EA5X5Y0 456 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SRRM3A6NNA2 597 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 EFNA1P20827 205 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CCNOP22674 350 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 TNFRSF8P28908 595 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SEC13P55735 322 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SSTP61278 116 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 PCBP1Q15365 356 aaKnown RBP eCLIP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CELF3Q5SZQ8 465 aaKnown RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SHQ1Q6PI26 577 aaKnown RBP10.2□□□□□ -0.78
CLIP1-201ENST00000302528 LRTOMTQ8WZ04 291 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 DPAGT1Q9H3H5 408 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 ACSS2Q9NR19 701 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 ARHGEF4Q9NR80 690 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 SDHAF3Q9NRP4 125 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 CLCA3PQ9Y6N3 262 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 DIP2AQ14689 1571 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 A0A1W2PQH9 124 aa10.2□□□□□ -0.78
CLIP1-201ENST00000302528 NPIPA5E9PKD4 350 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms