RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 PPM1AP35813 382 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 MAPK8P45983 427 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 EEFSECP57772 596 aaKnown RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 PWP1Q13610 501 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 DDX39BQ13838 428 aaKnown RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 USP39Q53GS9 565 aaKnown RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 ANKRD26P1Q6NSI1 321 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 GCNT7Q6ZNI0 430 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 ZNF786Q8N393 782 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 DPP10Q8N608 796 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 ZNF784Q8NCA9 323 aaPredicted RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 TSPAN14Q8NG11 270 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 TSPEARQ8WU66 669 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 SELENOMQ8WWX9 145 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 ELMO1Q92556 727 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 MRGPRX3Q96LB0 322 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 WRAP53Q9BUR4 548 aaKnown RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 ADI1Q9BV57 179 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 NTMT1Q9BV86 223 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 RBM38Q9H0Z9 239 aaKnown RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 DDX18Q9NVP1 670 aaKnown RBP11.49□□□□□ -0.57
RHO-201ENST00000296271 GPRC5BQ9NZH0 403 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 THEGQ9P2T0 379 aa11.49□□□□□ -0.57
RHO-201ENST00000296271 CEP290O15078 2479 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 H3BNH8 94 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 UPK1AO00322 258 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 RGS14O43566 566 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 TIMP2P16035 220 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 JAK1P23458 1154 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 HTR1EP28566 365 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 MRPL19P49406 292 aaKnown RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 MAPKAPK3Q16644 382 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 PGS1Q32NB8 556 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
RHO-201ENST00000296271 ZNF551Q7Z340 670 aaPredicted RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 C12orf76Q8N812 135 aaPredicted RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 FRS2Q8WU20 508 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 POF1BQ8WVV4 589 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 ASB11Q8WXH4 323 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 APOLD1Q96LR9 279 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 PPP3R2Q96LZ3 170 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 NSMCE2Q96MF7 247 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 OR52E6Q96RD3 313 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 CCT7Q99832 543 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 TMCO1Q9UM00 188 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 ERVW-1Q9UQF0 538 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 PPIL1Q9Y3C6 166 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 IGLV3-16A0A075B6K0 115 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 H0Y858 1186 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 IFRD1O00458 451 aaPredicted RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 H6PDO95479 791 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 EBLN1P0CF75 366 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 MYCLP1P12525 358 aaPredicted RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 HLA-EP13747 358 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 CEBPBP17676 345 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 PDHA2P29803 388 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 VIPR2P41587 438 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 HSPA13P48723 471 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 MERTKQ12866 999 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 CAMK1Q14012 370 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 CCDC149Q6ZUS6 474 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 TRIM46Q7Z4K8 759 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 APLFQ8IW19 511 aaPredicted RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 CLEC4FQ8N1N0 589 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 CDC26Q8NHZ8 85 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 USP7Q93009 1102 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 RSPRY1Q96DX4 576 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 MTERF1Q99551 399 aaKnown RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 MRPS26Q9BYN8 205 aaKnown RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 ANKRD60Q9BZ19 345 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 TRIM15Q9C019 465 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 SLC32A1Q9H598 525 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 PARVBQ9HBI1 364 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 EIF3LQ9Y262 564 aaKnown RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 ZNF510Q9Y2H8 683 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 PCDHB14Q9Y5E9 798 aa11.48□□□□□ -0.57
RHO-201ENST00000296271 HELZP42694 1942 aaKnown RBP11.48□□□□□ -0.57
RHO-201ENST00000296271 ATG2BQ96BY7 2078 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 OTOL1A6NHN0 477 aaPredicted RBP11.47□□□□□ -0.57
RHO-201ENST00000296271 TMX2-CTNND1H3BSU7 103 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 K7ESM1 405 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 ARNTLO00327 626 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 TSPAN6O43657 245 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 KCNH1O95259 989 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 OR56A5P0C7T3 313 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 CTNNB1P35222 781 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 BDKRB1P46663 353 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 CYP4F3Q08477 520 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 TTLL9Q3SXZ7 439 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 CWF19L1Q69YN2 538 aaKnown RBP11.47□□□□□ -0.57
RHO-201ENST00000296271 RIMKLAQ8IXN7 391 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 MRPL43Q8N983 215 aaKnown RBP11.47□□□□□ -0.57
RHO-201ENST00000296271 ITFG1Q8TB96 612 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 SGCDQ92629 289 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 MPP4Q96JB8 637 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 CPEB1Q9BZB8 566 aaKnown RBP11.47□□□□□ -0.57
RHO-201ENST00000296271 FAM83DQ9H4H8 585 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 OCEL1Q9H607 264 aa11.47□□□□□ -0.57
RHO-201ENST00000296271 C1orf109Q9NX04 203 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms