RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 SLC5A12Q1EHB4 618 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 SLC6A19Q695T7 634 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 ZNF655Q8N720 491 aaPredicted RBP18.91■□□□□ 0.62
CXCL3-201ENST00000296026 PROKR1Q8TCW9 393 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 PNPLA2Q96AD5 504 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 HES6Q96HZ4 224 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 IP6K3Q96PC2 410 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 RBSNQ9H1K0 784 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 ETNK1Q9HBU6 452 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 TXLNGQ9NUQ3 528 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 IRAK4Q9NWZ3 460 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 IFT80Q9P2H3 777 aaPredicted RBP18.91■□□□□ 0.62
CXCL3-201ENST00000296026 SLC2A6Q9UGQ3 507 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 PTRH2Q9Y3E5 179 aaKnown RBP18.91■□□□□ 0.62
CXCL3-201ENST00000296026 FER1L5A0AVI2 2057 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 F8W8V4 182 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 CD63P08962 238 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 PEBP1P30086 187 aaKnown RBP18.9■□□□□ 0.62
CXCL3-201ENST00000296026 STIP1P31948 543 aaKnown RBP18.9■□□□□ 0.62
CXCL3-201ENST00000296026 FOLR3P41439 243 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 SLC9A5Q14940 896 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 KIR2DS3Q14952 304 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 TSTD2Q5T7W7 516 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 TLDC1Q6P9B6 456 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 AFTPHQ6ULP2 937 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 PPP1R21Q6ZMI0 780 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 TMEM139Q8IV31 216 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 FAM20CQ8IXL6 584 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 DNAJC22Q8N4W6 341 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 DESI2Q9BSY9 194 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 AP1M1Q9BXS5 423 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 MAP10Q9P2G4 905 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 NDOR1Q9UHB4 597 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 SRPK3Q9UPE1 567 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 PLCL2Q9UPR0 1127 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 CDYLQ9Y232 598 aa18.9■□□□□ 0.62
CXCL3-201ENST00000296026 SHANK1Q9Y566 2161 aa18.89■□□□□ 0.62
CXCL3-201ENST00000296026 E7EVH7 732 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 SUN1O94901 812 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 ADRA1DP25100 572 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 CCR7P32248 378 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 FDFT1P37268 417 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 GRIA1P42261 906 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 HSPA14Q0VDF9 509 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 DNAJC21Q5F1R6 531 aaKnown RBP18.89■□□□□ 0.61
CXCL3-201ENST00000296026 VWA5B1Q5TIE3 1220 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 SLC22A15Q8IZD6 547 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 TXLNBQ8N3L3 684 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 OR2Y1Q8NGV0 311 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 OR6P1Q8NGX9 317 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 OR4L1Q8NH43 312 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 FER1L6-AS2Q96M78 137 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 ZNF778Q96MU6 729 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 RANBP9Q96S59 729 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 NDC1Q9BTX1 674 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 C5AR2Q9P296 337 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 RIMKLBQ9ULI2 386 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 CAPN6Q9Y6Q1 641 aa18.89■□□□□ 0.61
CXCL3-201ENST00000296026 USP9YO00507 2555 aaPredicted RBP18.88■□□□□ 0.61
CXCL3-201ENST00000296026 USP9XQ93008 2570 aaPredicted RBP18.88■□□□□ 0.61
CXCL3-201ENST00000296026 SPENQ96T58 3664 aaKnown RBP18.88■□□□□ 0.61
CXCL3-201ENST00000296026 SEC16AO15027 2179 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 TCP11X1B4DZS4 312 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 PEX12O00623 359 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 LIASO43766 372 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 CNOT3O75175 753 aaKnown RBP18.88■□□□□ 0.61
CXCL3-201ENST00000296026 IFNB1P01574 187 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 MAGP20916 626 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 PKLRP30613 574 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 RAB28P51157 221 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 FOXL2P58012 376 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 ACVR1Q04771 509 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 SEMA3AQ14563 771 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 OASLQ15646 514 aaKnown RBP18.88■□□□□ 0.61
CXCL3-201ENST00000296026 NKAIN1Q4KMZ8 207 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 FASTKD1Q53R41 847 aaKnown RBP18.88■□□□□ 0.61
CXCL3-201ENST00000296026 DCAF10Q5QP82 559 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 ZNF534Q76KX8 674 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 VRK3Q8IV63 474 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 CLEC1AQ8NC01 280 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 SSC4DQ8WTU2 575 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 PTERQ96BW5 349 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 P4HTMQ9NXG6 502 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 EURLQ9NYK6 297 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 ZNF148Q9UQR1 794 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 KLHL20Q9Y2M5 609 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 CCDC88CQ9P219 2028 aa18.88■□□□□ 0.61
CXCL3-201ENST00000296026 IQCF5A8MTL0 148 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 SEMA7AO75326 666 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 IGHEP01854 428 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 VARSP26640 1264 aaKnown RBP18.87■□□□□ 0.61
CXCL3-201ENST00000296026 PPARGP37231 505 aaPredicted RBP18.87■□□□□ 0.61
CXCL3-201ENST00000296026 PRAMEP78395 509 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 MRPL49Q13405 166 aaKnown RBP18.87■□□□□ 0.61
CXCL3-201ENST00000296026 C4orf17Q53FE4 359 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 SEL1L2Q5TEA6 688 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 MRPL14Q6P1L8 145 aaKnown RBP18.87■□□□□ 0.61
CXCL3-201ENST00000296026 PRUNE1Q86TP1 453 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 GALNT16Q8N428 558 aa18.87■□□□□ 0.61
CXCL3-201ENST00000296026 LMNTD1Q8N9Z9 388 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms