RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 VTI1BQ9UEU0 232 aa12.61□□□□□ -0.39
ZIC3-201ENST00000287538 OAZ3Q9UMX2 235 aa12.61□□□□□ -0.39
ZIC3-201ENST00000287538 NUMA1Q14980 2115 aa12.61□□□□□ -0.39
ZIC3-201ENST00000287538 REV3LO60673 3130 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 TRIM64A6NGJ6 449 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 TOR1BO14657 336 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 SCAMP1O15126 338 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 EFEMP2O95967 443 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 CLCN4P51793 760 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 SLC7A2P52569 658 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 GRSF1Q12849 480 aaKnown RBP eCLIP12.6□□□□□ -0.39
ZIC3-201ENST00000287538 SELENBP1Q13228 472 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 NFATC2Q13469 925 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 ACOX1Q15067 660 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 NDUFA5Q16718 116 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 VPS26BQ4G0F5 336 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 USP45Q70EL2 814 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 SFTPA1Q8IWL2 248 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 DHRSXQ8N5I4 330 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 LMNTD1Q8N9Z9 388 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 PDPRQ8NCN5 879 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 SNX19Q92543 992 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 ULK4Q96C45 1275 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 PSD2Q9BQI7 771 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 CEP44Q9C0F1 390 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 ANKRD36A6QL64 1941 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 TBC1D3BA6NDS4 549 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 JRKO75564 520 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 ETV3P41162 512 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 SLC7A9P82251 487 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 DDX39BQ13838 428 aaKnown RBP12.6□□□□□ -0.39
ZIC3-201ENST00000287538 CAPRIN1Q14444 709 aaKnown RBP12.6□□□□□ -0.39
ZIC3-201ENST00000287538 CARD16Q5EG05 197 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 AGAP7PQ5VUJ5 663 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 KLHDC8BQ8IXV7 354 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 NKAPQ8N5F7 415 aaKnown RBP12.6□□□□□ -0.39
ZIC3-201ENST00000287538 PACRGLQ8N7B6 248 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 CD200R1Q8TD46 325 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 FUBP1Q96AE4 644 aaKnown RBP12.6□□□□□ -0.39
ZIC3-201ENST00000287538 HMG20AQ9NP66 347 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 INTS10Q9NVR2 710 aaKnown RBP12.6□□□□□ -0.39
ZIC3-201ENST00000287538 DNAJC15Q9Y5T4 150 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 EI24O14681 340 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 MRASO14807 208 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 KRT75O95678 551 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 MTHFD2P13995 350 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 SLC6A11P48066 632 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 METAP1P53582 386 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 DIO3P55073 304 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 CREMQ03060 361 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 ABRQ12979 859 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 MAPK11Q15759 364 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 FNDC3BQ53EP0 1204 aaKnown RBP12.6□□□□□ -0.39
ZIC3-201ENST00000287538 SAMD4BQ5PRF9 694 aaKnown RBP12.6□□□□□ -0.39
ZIC3-201ENST00000287538 INTS11Q5TA45 600 aaKnown RBP12.6□□□□□ -0.39
ZIC3-201ENST00000287538 IL27RAQ6UWB1 636 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 CLYBLQ8N0X4 340 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 FOXJ1Q92949 421 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 TADA1Q96BN2 335 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 ZNF641Q96N77 438 aaPredicted RBP12.6□□□□□ -0.39
ZIC3-201ENST00000287538 CSF3RQ99062 836 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 C9orf16Q9BUW7 83 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 LRRC3Q9BY71 257 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 ATG10Q9H0Y0 220 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 MED16Q9Y2X0 877 aa12.6□□□□□ -0.39
ZIC3-201ENST00000287538 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.59□□□□□ -0.39
ZIC3-201ENST00000287538 ANKRD34BA5PLL1 514 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 EIF3FO00303 357 aaPredicted RBP12.59□□□□□ -0.39
ZIC3-201ENST00000287538 NPHS1O60500 1241 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 ALOX5P09917 674 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 LRP8Q14114 963 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 INAVAQ3KP66 663 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 SERPINA13PQ6UXR4 307 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 SPPL2CQ8IUH8 684 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 RAB2BQ8WUD1 216 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 VPS33AQ96AX1 596 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 CLIP3Q96DZ5 547 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 NRBF2Q96F24 287 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 LRRC3BQ96PB8 259 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 COPS8Q99627 209 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 ZFP14Q9HCL3 533 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 POLE4Q9NR33 117 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 MBD1Q9UIS9 605 aaPredicted RBP12.59□□□□□ -0.39
ZIC3-201ENST00000287538 SLCO1B7G3V0H7 640 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 CHEK2O96017 543 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 EIF2S1P05198 315 aaKnown RBP12.59□□□□□ -0.39
ZIC3-201ENST00000287538 FASP25445 335 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 SPAM1P38567 509 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 PTGER3P43115 390 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 POLD2P49005 469 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 RGS4P49798 205 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 CPSF6Q16630 551 aaKnown RBP eCLIP12.59□□□□□ -0.39
ZIC3-201ENST00000287538 MAGEE2Q8TD90 523 aaPredicted RBP12.59□□□□□ -0.39
ZIC3-201ENST00000287538 ARMC5Q96C12 935 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 TUBA1CQ9BQE3 449 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 LHPPQ9H008 270 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 ANKMY1Q9P2S6 941 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 EGFL7Q9UHF1 273 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 NOTCH4Q99466 2003 aa12.59□□□□□ -0.39
ZIC3-201ENST00000287538 DHRS12A0PJE2 317 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms