RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ANKS6Q68DC2 871 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 METTL2BQ6P1Q9 378 aaKnown RBP18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 RABEPKQ7Z6M1 372 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 CRLF3Q8IUI8 442 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 CCDC197Q8NCU1 140 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 CEP76Q8TAP6 659 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 UBTD2Q8WUN7 234 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 ATL1Q8WXF7 558 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 ESAMQ96AP7 390 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 THOC1Q96FV9 657 aaKnown RBP18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 CD244Q9BZW8 370 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 MVB12BQ9H7P6 319 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 NPHS2Q9NP85 383 aa18.39■□□□□ 0.53
PDLIM3-202ENST00000284770 SDK1Q7Z5N4 2213 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 SLC16A8O95907 504 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 RPS17P08708 135 aaKnown RBP18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 TROVE2P10155 538 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 PRKG2Q13237 762 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 GRB7Q14451 532 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 ZSCAN26Q16670 478 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 DUOXA1Q1HG43 343 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 ZXDCQ2QGD7 858 aaPredicted RBP18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 DUS1LQ6P1R4 473 aaKnown RBP18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 IYDQ6PHW0 289 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 LSMEM2Q8N112 164 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 SDR16C5Q8N3Y7 309 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 LMX1AQ8TE12 382 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 TMEM79Q9BSE2 394 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 TRIM55Q9BYV6 548 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 GSTO2Q9H4Y5 243 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 STOX2Q9P2F5 926 aaPredicted RBP18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 CIDEBQ9UHD4 219 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 POLG2Q9UHN1 485 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 ASB1Q9Y576 335 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 COLEC10Q9Y6Z7 277 aa18.38■□□□□ 0.53
PDLIM3-202ENST00000284770 E2F3O00716 465 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 AQP9O43315 295 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 CCR10P46092 362 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 HSPA7P48741 367 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 KRT33BQ14525 404 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 FRMD7Q6ZUT3 714 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 RPS27LQ71UM5 84 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 GKN2Q86XP6 184 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 ZNF548Q8NEK5 533 aaPredicted RBP18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 RFWD2Q8NHY2 731 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 PPP4R1Q8TF05 950 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 C10orf82Q8WW14 230 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 TRMOQ9BU70 441 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 KCNK13Q9HB14 408 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 ZNF624Q9P2J8 865 aaPredicted RBP18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 HAO1Q9UJM8 370 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 PCTPQ9UKL6 214 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 TDRKHQ9Y2W6 561 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 ZFC3H1O60293 1989 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 OR5K4A6NMS3 321 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 STK16O75716 305 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 PIAS2O75928 621 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 HSPA4LO95757 839 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 CHRNGP07510 517 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 NDUFS1P28331 727 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 IMPA1P29218 277 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 GALNT1Q10472 559 aaPredicted RBP18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 ARL13AQ5H913 290 aaPredicted RBP18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 AGTRAPQ6RW13 159 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 FAM46DQ8NEK8 389 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 PIWIL2Q8TC59 973 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 ZNF483Q8TF39 744 aaPredicted RBP18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 ZNF480Q8WV37 535 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 LOXL4Q96JB6 756 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 ELF4Q99607 663 aaPredicted RBP18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 HGH1Q9BTY7 390 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 ATG10Q9H0Y0 220 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 ARL2BPQ9Y2Y0 163 aa18.37■□□□□ 0.53
PDLIM3-202ENST00000284770 KNL1Q8NG31 2342 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 SNUPNO95149 360 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 CFIP05156 583 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 SLC2A4P14672 509 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 XRCC1P18887 633 aaPredicted RBP18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 SLC19A1P41440 591 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 GDF5P43026 501 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 SLC6A12P48065 614 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 RXRGP48443 463 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 ARRB1P49407 418 aaPredicted RBP18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 CDH13P55290 713 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 LPAL2Q16609 132 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 PTCHD3Q3KNS1 767 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 ZC3H14Q6PJT7 736 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 NAGSQ8N159 534 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 ANKS4BQ8N8V4 417 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 CXorf40BQ96DE9 158 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 CAMK1GQ96NX5 476 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 NSUN5Q96P11 429 aaKnown RBP18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 MARCOQ9UEW3 520 aaPredicted RBP18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 DOLKQ9UPQ8 538 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 R4GN57 208 aa18.36■□□□□ 0.53
PDLIM3-202ENST00000284770 TRBV23OR9-2A0A075B6M9 112 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 KIR2DS5A0A0G2JLQ3 304 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 A0A0G2JNG1 304 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 ERICH4A6NGS2 130 aa18.35■□□□□ 0.53
PDLIM3-202ENST00000284770 LMO7DNF2Z398 122 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms