RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 SYT16Q17RD7 645 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 IL27RAQ6UWB1 636 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 RFPL4BQ6ZWI9 263 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 TAS2R42Q7RTR8 314 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 MSRB3Q8IXL7 192 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 DPP10Q8N608 796 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 RHOXF1Q8NHV9 184 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 NCLNQ969V3 563 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 SMARCD1Q96GM5 515 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 RTP3Q9BQQ7 232 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 WDR70Q9NW82 654 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 SLC25A37Q9NYZ2 338 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 IL37Q9NZH6 218 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.11□□□□□ -0.63
SCLT1-201ENST00000281142 AGO1Q9UL18 857 aaKnown RBP11.11□□□□□ -0.63
SCLT1-201ENST00000281142 CDH23Q9H251 3354 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 C1QCP02747 245 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 HOXC13P31276 330 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 SUOXP51687 545 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 EIF4EBP2Q13542 120 aaPredicted RBP11.11□□□□□ -0.63
SCLT1-201ENST00000281142 NR6A1Q15406 480 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 SOWAHCQ53LP3 525 aaPredicted RBP11.11□□□□□ -0.63
SCLT1-201ENST00000281142 PIK3R6Q5UE93 754 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 MARC1Q5VT66 337 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 AFMIDQ63HM1 303 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 GPRIN3Q6ZVF9 776 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 C11orf74Q86VG3 221 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 CHPFQ8IZ52 775 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 ARRDC2Q8TBH0 407 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 LGALS12Q96DT0 336 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 UGT2B28Q9BY64 529 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 RASSF1Q9NS23 344 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 OSER1Q9NX31 292 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 CEP290O15078 2479 aa11.11□□□□□ -0.63
SCLT1-201ENST00000281142 ANKRD28O15084 1053 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 NIPSNAP2O75323 286 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 NDST3O95803 873 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CAPN1P07384 714 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CLK3P49761 638 aaKnown RBP11.1□□□□□ -0.63
SCLT1-201ENST00000281142 ZNF135P52742 658 aaPredicted RBP11.1□□□□□ -0.63
SCLT1-201ENST00000281142 VAC14Q08AM6 782 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 PWP1Q13610 501 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 PON2Q15165 354 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CCDC58Q4VC31 144 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 DESI1Q6ICB0 168 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CEP68Q76N32 757 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 GALNT10Q86SR1 603 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 NPAS4Q8IUM7 802 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 SIDT2Q8NBJ9 832 aaKnown RBP11.1□□□□□ -0.63
SCLT1-201ENST00000281142 MCFD2Q8NI22 146 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 PHF10Q8WUB8 498 aaKnown RBP11.1□□□□□ -0.63
SCLT1-201ENST00000281142 TXNDC15Q96J42 360 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 B3GALT6Q96L58 329 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 ASPSCR1Q9BZE9 553 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 RNF167Q9H6Y7 350 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 NMUR1Q9HB89 426 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 NECTIN3Q9NQS3 549 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CATSPERZQ9NTU4 200 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 USE1Q9NZ43 259 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 C3orf18Q9UK00 162 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 LRFN2Q9ULH4 789 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 PRELID1Q9Y255 219 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CXCR6O00574 342 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 FGF10O15520 208 aaPredicted RBP11.1□□□□□ -0.63
SCLT1-201ENST00000281142 GPR39O43194 453 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 OR1I1O60431 355 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 B4GALT3O60512 393 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 UPK1BO75841 260 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CYP11A1P05108 521 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 TRPC1P48995 793 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 STC1P52823 247 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 PPP5CP53041 499 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 SLC35A2P78381 396 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CYP4F3Q08477 520 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 PTPRRQ15256 657 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CARD16Q5EG05 197 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 PRSS36Q5K4E3 855 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCLT1-201ENST00000281142 UBE2UQ5VVX9 321 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CES5AQ6NT32 575 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 GCNT7Q6ZNI0 430 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 GALNT7Q86SF2 657 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 LRRTM3Q86VH5 581 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 BPHLQ86WA6 291 aaPredicted RBP11.1□□□□□ -0.63
SCLT1-201ENST00000281142 HEATR4Q86WZ0 1026 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CELF2-AS1Q8N7Q2 184 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 OR4L1Q8NH43 312 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CLHC1Q8NHS4 586 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 NETO1Q8TDF5 533 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 CASD1Q96PB1 797 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 SEMA3CQ99985 751 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 HCSTQ9UBK5 93 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 PKP3Q9Y446 797 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 GPSM3Q9Y4H4 160 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 E2F3O00716 465 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 KMOO15229 486 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 INPPL1O15357 1258 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 HOXC11O43248 304 aaPredicted RBP11.1□□□□□ -0.63
SCLT1-201ENST00000281142 RFPL2O75678 378 aa11.1□□□□□ -0.63
SCLT1-201ENST00000281142 THP07101 528 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms