RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 FRG1Q14331 258 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 ZNF460Q14592 562 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 USP10Q14694 798 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 SF1Q15637 639 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 KYNUQ16719 465 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 KBTBD12Q3ZCT8 623 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CCSMST1Q4G0I0 132 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 DCAF12Q5T6F0 453 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 THEMIS2Q5TEJ8 643 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 ANKS6Q68DC2 871 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 LRRC8EQ6NSJ5 796 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CYB5D1Q6P9G0 228 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 PAQR3Q6TCH7 311 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CEACAM20Q6UY09 585 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 RAPH1Q70E73 1250 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 FRA10AC1Q70Z53 315 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 PRSS42Q7Z5A4 293 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 GALNT7Q86SF2 657 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 ZC3HC1Q86WB0 502 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 PROSER1Q86XN7 944 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 SYTL1Q8IYJ3 562 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 ZNF248Q8NDW4 579 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 EEF1AKMT1Q8WVE0 214 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 FGF11Q92914 225 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 TSPAN17Q96FV3 270 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 PPM1MQ96MI6 270 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 SLC46A1Q96NT5 459 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 TAAR9Q96RI9 348 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CD180Q99467 661 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 OLFM1Q99784 485 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CPNE1Q99829 537 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 ACAT2Q9BWD1 397 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 TMEM121BQ9BXQ6 578 aaPredicted RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 UNKQ9C0B0 810 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 SLC7A5P2Q9GIP4 190 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 RAB33BQ9H082 229 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 TSPYL1Q9H0U9 437 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 CDC42EP4Q9H3Q1 356 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 RHOJQ9H4E5 214 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 ZNF768Q9H5H4 540 aaKnown RBP6.33□□□□□ -1.4
CD44-204ENST00000279452 CAB39LQ9H9S4 337 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 LRRC4CQ9HCJ2 640 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 GPAMQ9HCL2 828 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 PDE7BQ9NP56 450 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 SMYD2Q9NRG4 433 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 MOCS1Q9NZB8 636 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 NINJ2Q9NZG7 142 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 OR6C2Q9NZP2 312 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 FOXJ2Q9P0K8 574 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 EPHA6Q9UF33 1036 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 POMT2Q9UKY4 750 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 VWA7Q9Y334 891 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 DHRS7Q9Y394 339 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 IKBKGQ9Y6K9 419 aa6.33□□□□□ -1.4
CD44-204ENST00000279452 A0A0J9YY10 115 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 NPEPPSL1A6NEC2 478 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 FAM159BA6NKW6 160 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ZNF839A8K0R7 811 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 B4E171 279 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 C9orf172C9J069 976 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 TOX3O15405 576 aaPredicted RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 PHGDHO43175 533 aaKnown RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 KLK10O43240 276 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 TLX3O43711 291 aaPredicted RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 PSIP1O75475 530 aaKnown RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 FAM155BO75949 473 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 SLU7O95391 586 aaKnown RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 ZBTB11O95625 1053 aaPredicted RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 GUCA1CO95843 209 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 C8GP07360 202 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 INHBAP08476 426 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 HIST1H2AGP0C0S8 130 aaPredicted RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 ST6GAL1P15907 406 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 STMN1P16949 149 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 NELFEP18615 380 aaKnown RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 HIST1H2ADP20671 130 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 PSMB5P28074 263 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 PRDX3P30048 256 aaKnown RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 RPA3P35244 121 aaPredicted RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 SPRP35270 261 aaPredicted RBP6.32□□□□□ -1.4
CD44-204ENST00000279452 TSPAN7P41732 249 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ATP1A2P50993 1020 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ERVPABLB-1P60509 514 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 HSD11B2P80365 405 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ACY1Q03154 408 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 NAB1Q13506 487 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 BMPR2Q13873 1038 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 GPR19Q15760 415 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 DEFB110Q30KQ9 67 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 BROXQ5VW32 411 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 SPESP1Q6UW49 350 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 NEK10Q6ZWH5 1172 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 TAOK1Q7L7X3 1001 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ARHGAP22Q7Z5H3 698 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ADCK2Q7Z695 626 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ZFAND4Q86XD8 727 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 TMEM126BQ8IUX1 230 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 FAM20CQ8IXL6 584 aa6.32□□□□□ -1.4
CD44-204ENST00000279452 ADGRF3Q8IZF5 1079 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms