RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 LGI4Q8N135 537 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 METTL21AQ8WXB1 218 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 MMP27Q9H306 513 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 TM9SF3Q9HD45 589 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 MRPL42Q9Y6G3 142 aaKnown RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 PDHXO00330 501 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 IFNA2P01563 188 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 MSL3P1P0C860 447 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 POU2F1P14859 743 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 PRPS1L1P21108 318 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 VARSP26640 1264 aaKnown RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 HSD17B2P37059 387 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 NDST2P52849 883 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 PSMA6P60900 246 aaKnown RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 SEC23BQ15437 767 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 PLEKHN1Q494U1 663 aaPredicted RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 HGSNATQ68CP4 663 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 OTOP3Q7RTS5 596 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF227Q86WZ6 799 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 CACUL1Q86Y37 369 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 RGL4Q8IZJ4 473 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 RAB11FIP5Q9BXF6 653 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 ELOA3DA6NLF2 546 aaPredicted RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 CILPO75339 1184 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 ATP5A1P25705 553 aaKnown RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 TNFSF9P41273 254 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 CRYBB1P53674 252 aaPredicted RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 GNA12Q03113 381 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 PUM1Q14671 1186 aaKnown RBP eCLIP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 ELOA3BQ3SY89 546 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 FAM174BQ3ZCQ3 159 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 ELOA3Q8NG57 546 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 AURKBQ96GD4 344 aaPredicted RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 ZSCAN5AQ9BUG6 496 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 USP29Q9HBJ7 922 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 GBA2Q9HCG7 927 aaPredicted RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 SPATA31A1Q5TZJ5 1347 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 ARPC4-TTLL3A0A0A6YYG9 625 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 MANSC4A6NHS7 340 aaPredicted RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 KLF11O14901 512 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 CDK14O94921 469 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 ADH1AP07327 375 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 FPR1P21462 350 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 F8A1P23610 371 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 SMSP52788 366 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 MADCAM1Q13477 382 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 ALG1LQ6GMV1 187 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 CIR1Q86X95 450 aaPredicted RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 CENPSQ8N2Z9 138 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 PRICKLE1Q96MT3 831 aaPredicted RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 RDH12Q96NR8 316 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 HSD17B14Q9BPX1 270 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 FARSAQ9Y285 508 aaKnown RBP8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 CLTCL1P53675 1640 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 COL1A2P08123 1366 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 H3BSA7 217 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 AGPSO00116 658 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 PCDHGA12O60330 932 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 RCBTB2O95199 551 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 CPN2P22792 545 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 HTR2AP28223 471 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 L1CAMP32004 1257 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC18A2Q05940 514 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 PON3Q15166 354 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 CRB2Q5IJ48 1285 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 DNM1P34Q6PK57 102 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 NDC1Q9BTX1 674 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 CPA4Q9UI42 421 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 SCP2D1Q9UJQ7 156 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 HSPB11Q9Y547 144 aa8.55□□□□□ -1.04
SCUBE3-201ENST00000274938 ZCCHC11Q5TAX3 1644 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TEX13CA0A0J9YWL9 993 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ABCB7O75027 752 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 LRCH4O75427 683 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 SLITRK5O94991 958 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 IMPDH1P20839 514 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 HOXC12P31275 282 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 UGT2B10P36537 528 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 YAP1P46937 504 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 DSC3Q14574 896 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 MAPK14Q16539 360 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 KCTD19Q17RG1 926 aaPredicted RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 PDE12Q6L8Q7 609 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 BAIAP2L2Q6UXY1 529 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 FAM84AQ96KN4 292 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 MIPEPQ99797 713 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 MAGEH1Q9H213 219 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 RANBP3Q9H6Z4 567 aaPredicted RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 BRD7Q9NPI1 651 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TMLHEQ9NVH6 421 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF670-ZNF695F2Z2N8 137 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TMBIM6P55061 237 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 SP140Q13342 867 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 CYP1B1Q16678 543 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ALG10Q5BKT4 473 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 C6orf183Q5T699 404 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 OR2T5Q6IEZ7 315 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ERMP1Q7Z2K6 904 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF572Q7Z3I7 529 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms