RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ERVK-8P63133 956 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 MRPS22P82650 360 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 CDC16Q13042 620 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 KHDC1Q4VXA5 237 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 FAM219BQ5XKK7 198 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 SLC30A9Q6PML9 568 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 RALGPS2Q86X27 583 aaPredicted RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 TMEM151AQ8N4L1 468 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 DEFB119Q8N690 84 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 REPS1Q96D71 796 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 PDLIM5Q96HC4 596 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 IL17FQ96PD4 163 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 CCT7Q99832 543 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 TRIT1Q9H3H1 467 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 SPAG4Q9NPE6 437 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 MRPS17Q9Y2R5 130 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 EIF4E1BA6NMX2 242 aaKnown RBP9.08□□□□□ -0.96
SSR3-201ENST00000265044 EVPLLA8MZ36 301 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 KMOO15229 486 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 VEGFDO43915 354 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 RASSF9O75901 435 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 EBLN1P0CF75 366 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 ALDH9A1P49189 494 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 POLR2JP52435 117 aaKnown RBP9.08□□□□□ -0.96
SSR3-201ENST00000265044 ABRAXAS2Q15018 415 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 GSTA3Q16772 222 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 C6orf136Q5SQH8 315 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 HOMEZQ8IX15 550 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 FAM9CQ8IZT9 166 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 LMNTD1Q8N9Z9 388 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 PLA2G15Q8NCC3 412 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 ICA1LQ8NDH6 482 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 PTCD3Q96EY7 689 aaKnown RBP9.08□□□□□ -0.96
SSR3-201ENST00000265044 MIPEPQ99797 713 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 EBPLQ9BY08 206 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 MEAF6Q9HAF1 191 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 RNPEPL1Q9HAU8 725 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 CLEC1BQ9P126 229 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 SLC7A8Q9UHI5 535 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 LEF1Q9UJU2 399 aaPredicted RBP9.08□□□□□ -0.96
SSR3-201ENST00000265044 PNMA8BQ9ULN7 279 aaPredicted RBP9.08□□□□□ -0.96
SSR3-201ENST00000265044 CYP8B1Q9UNU6 501 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 MED16Q9Y2X0 877 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 NOTCH4Q99466 2003 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 TRBV5-4A0A0C4DH59 114 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 MPC1LP0DKB6 136 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 CLDN2P57739 230 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 SF1Q15637 639 aaKnown RBP9.08□□□□□ -0.96
SSR3-201ENST00000265044 WSCD2Q2TBF2 565 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 SAMD4BQ5PRF9 694 aaKnown RBP9.08□□□□□ -0.96
SSR3-201ENST00000265044 REP15Q6BDI9 236 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 PNCKQ6P2M8 343 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 LRRC70Q7Z2Q7 622 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 KRT78Q8N1N4 520 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 CPSF7Q8N684 471 aaKnown RBP9.08□□□□□ -0.96
SSR3-201ENST00000265044 HCAR2Q8TDS4 363 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 PPM1MQ96MI6 270 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 MCMBPQ9BTE3 642 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 TPSD1Q9BZJ3 242 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 C1orf109Q9NX04 203 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 EGFL7Q9UHF1 273 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 PLXNA3P51805 1871 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 CXorf51AA0A1B0GTR3 108 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 E2F3O00716 465 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 PI15O43692 258 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 NUAK1O60285 661 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 PSMG1O95456 288 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 TSPAN12O95859 305 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 FGF4P08620 206 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 G6PDP11413 515 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 COX7A2P14406 83 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 TNFRSF4P43489 277 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 PXNP49023 591 aaPredicted RBP9.08□□□□□ -0.96
SSR3-201ENST00000265044 DCDC1P59894 354 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 UFM1P61960 85 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 CDK3Q00526 305 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 B4GALNT1Q00973 533 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 SP140Q13342 867 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 PCBP2Q15366 365 aaKnown RBP eCLIP9.08□□□□□ -0.96
SSR3-201ENST00000265044 SLC44A4Q53GD3 710 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 FRG2Q64ET8 278 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 KIAA1211LQ6NV74 962 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 FBXW8Q8N3Y1 598 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 LIX1Q8N485 282 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 BHLHE22Q8NFJ8 381 aaPredicted RBP9.08□□□□□ -0.96
SSR3-201ENST00000265044 OR10G6Q8NH81 332 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 ASB11Q8WXH4 323 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 GLMNQ92990 594 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 LMLNQ96KR4 655 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 GBP5Q96PP8 586 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 FRG2BQ96QU4 278 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 OR52E6Q96RD3 313 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 TBCDQ9BTW9 1192 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 RMND5AQ9H871 391 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 TNFRSF12AQ9NP84 129 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 MIEF1Q9NQG6 463 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 INVSQ9Y283 1065 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 PPIL1Q9Y3C6 166 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 ASB1Q9Y576 335 aa9.08□□□□□ -0.96
SSR3-201ENST00000265044 COL4A6Q14031 1691 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms