RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 PRDM15P57071 1507 aaPredicted RBP11.19□□□□□ -0.62
PTPN4-201ENST00000263708 GADD45GO95257 159 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 S100PP25815 95 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 UGT1A3P35503 534 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 PDSS1Q5T2R2 415 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 REP15Q6BDI9 236 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 SDHAF3Q9NRP4 125 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 IQGAP3Q86VI3 1631 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 AFDNP55196 1824 aaKnown RBP11.19□□□□□ -0.62
PTPN4-201ENST00000263708 A0A1W2PPL8 197 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 LPCAT4Q643R3 524 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 NYAP1Q6ZVC0 841 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 USP43Q70EL4 1123 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 SLAIN1Q8ND83 568 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 NIFKQ9BYG3 293 aaKnown RBP11.19□□□□□ -0.62
PTPN4-201ENST00000263708 PADI2Q9Y2J8 665 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 DHX15O43143 795 aaKnown RBP11.19□□□□□ -0.62
PTPN4-201ENST00000263708 STK16O75716 305 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 IRF2P14316 349 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 SNTA1Q13424 505 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 TNFAIP8L2Q6P589 184 aaPredicted RBP11.19□□□□□ -0.62
PTPN4-201ENST00000263708 ACMSDQ8TDX5 336 aa11.19□□□□□ -0.62
PTPN4-201ENST00000263708 HTR3EA5X5Y0 456 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 BRINP1O60477 761 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 TRMUO75648 421 aaKnown RBP11.18□□□□□ -0.62
PTPN4-201ENST00000263708 GNB3P16520 340 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 GNRHRP30968 328 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 DLG4P78352 724 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 GPAT4Q86UL3 456 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 P2RY8Q86VZ1 359 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 ANKRD52Q8NB46 1076 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 PORCNQ9H237 461 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 KBTBD4Q9NVX7 518 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 HMGXB4Q9UGU5 601 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 YARS2Q9Y2Z4 477 aaKnown RBP11.18□□□□□ -0.62
PTPN4-201ENST00000263708 C2orf92A0A1B0GVN3 265 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 A0A1W2PRQ8 180 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 MYCLP1P12525 358 aaPredicted RBP11.18□□□□□ -0.62
PTPN4-201ENST00000263708 BCKDHAP12694 445 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 MAGEA3P43357 314 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 PIGZQ86VD9 579 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 KLHL36Q8N4N3 616 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 MFSD2AQ8NA29 543 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 OR8S1Q8NH09 359 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 FEM1AQ9BSK4 669 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 BCAS3Q9H6U6 928 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 RCOR3Q9P2K3 495 aaPredicted RBP11.18□□□□□ -0.62
PTPN4-201ENST00000263708 SHOXO15266 292 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 NOBOXO60393 691 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 GLUD2P49448 558 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 RAB4BP61018 213 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 KCNJ2P63252 427 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 SLC3A1Q07837 685 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 TM9SF2Q99805 663 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 TIMMDC1Q9NPL8 285 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 TMPRSS11EQ9UL52 423 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 ZNF521Q96K83 1311 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 A0A1B0GVT2 93 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 CTHP32929 405 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 WNT3AP56704 352 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 LDB1Q86U70 411 aaPredicted RBP11.18□□□□□ -0.62
PTPN4-201ENST00000263708 RNF157Q96PX1 679 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 PRDM12Q9H4Q4 367 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 ANKHQ9HCJ1 492 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 ADAM18Q9Y3Q7 739 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 INO80Q9ULG1 1556 aaPredicted RBP11.18□□□□□ -0.62
PTPN4-201ENST00000263708 MAGEB17A8MXT2 336 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 J3QRK9 145 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 SLITRK3O94933 977 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 CPNE6O95741 557 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 IFNA7P01567 189 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 RPLP0P05388 317 aaKnown RBP11.18□□□□□ -0.62
PTPN4-201ENST00000263708 FOXR2Q6PJQ5 311 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 TMEM220Q6QAJ8 160 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 CMC1Q7Z7K0 106 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 GRPEL2Q8TAA5 225 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 ZNF670Q9BS34 389 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 CNTNAP1P78357 1384 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 FAM234BA2RU67 622 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 MPIP34949 423 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 IL23RQ5VWK5 629 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 GNG13Q9P2W3 67 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 A2ML1A8K2U0 1454 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 HHLA1C9JL84 531 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 ANKRD63C9JTQ0 380 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 FBP2O00757 339 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 DGKEP52429 567 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 GNG2P59768 71 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 AZIN2Q96A70 460 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 CLUHO75153 1309 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 NTSR2O95665 410 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 SLC2A2P11168 524 aaPredicted RBP11.18□□□□□ -0.62
PTPN4-201ENST00000263708 GLP1RP43220 463 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 MLC1Q15049 377 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 EIF5AL1Q6IS14 154 aaKnown RBP11.18□□□□□ -0.62
PTPN4-201ENST00000263708 ZBED6CLQ96FA7 236 aaPredicted RBP11.18□□□□□ -0.62
PTPN4-201ENST00000263708 ANKRA2Q9H9E1 313 aa11.18□□□□□ -0.62
PTPN4-201ENST00000263708 TISP43B9A030 160 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 NDUFS4O43181 175 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 UNC5CO95185 931 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms