RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 F3P13726 295 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 SLC19A1P41440 591 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 SLC1A6P48664 564 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 ALDH18A1P54886 795 aaKnown RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 DNAJB13P59910 316 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 HNRNPKP61978 463 aaKnown RBP eCLIP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 HERVK_113P63132 956 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 GRIK2Q13002 908 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 TSTA3Q13630 321 aaPredicted RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 FASTKQ14296 549 aaKnown RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 KRT33BQ14525 404 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 SETDB1Q15047 1291 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 DEFB133Q30KQ1 61 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 PEAR1Q5VY43 1037 aaPredicted RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 TCEAL6Q6IPX3 200 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 IYDQ6PHW0 289 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 UNC5DQ6UXZ4 953 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 SLC22A9Q8IVM8 553 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 LSMEM2Q8N112 164 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 NAGSQ8N159 534 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 PDPRQ8NCN5 879 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 OR9A1PQ8NGU1 263 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 OR5K2Q8NHB8 316 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 TCEAL3Q969E4 200 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 SKA1Q96BD8 255 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 THOC1Q96FV9 657 aaKnown RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 CAMK1GQ96NX5 476 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 ZNF317Q96PQ6 595 aaPredicted RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 ERVK-6Q9BXR3 956 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 TRIM54Q9BYV2 358 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 PITPNM3Q9BZ71 974 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 FAM107BQ9H098 131 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 TRIT1Q9H3H1 467 aaKnown RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 GSTO2Q9H4Y5 243 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 STOX2Q9P2F5 926 aaPredicted RBP9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 SPASTQ9UBP0 616 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 SUSD2Q9UGT4 822 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 PCOLCE2Q9UKZ9 415 aa9.46□□□□□ -0.89
SNRNP40-201ENST00000263694 PABPN1LA6NDY0 278 aaKnown RBP9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 UBFD1O14562 309 aaKnown RBP9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 PIAS2O75928 621 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 MYF5P13349 255 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 IMPA1P29218 277 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 HALP42357 657 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 ABCE1P61221 599 aaKnown RBP9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 NFKB2Q00653 900 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 NAE1Q13564 534 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 ELOCQ15369 112 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 DUOXA1Q1HG43 343 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 HLA-BQ31612 363 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 PTCHD3Q3KNS1 767 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 TRIM61Q5EBN2 209 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 CFAP157Q5JU67 520 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 SULT1C3Q6IMI6 304 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 AGTRAPQ6RW13 159 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 SUSD1Q6UWL2 747 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 WASH2PQ6VEQ5 465 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 RAB44Q7Z6P3 723 aaPredicted RBP9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 ZNF761Q86XN6 746 aaPredicted RBP9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 GATAD2AQ86YP4 633 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 DCUN1D3Q8IWE4 304 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 TBC1D21Q8IYX1 336 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC25A45Q8N413 288 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 TEX9Q8N6V9 391 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 DCBLD1Q8N8Z6 715 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 AGR3Q8TD06 166 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC37A2Q8TED4 501 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 TRPC4APQ8TEL6 797 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 ZDHHC1Q8WTX9 485 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 ZNF480Q8WV37 535 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 FBXL8Q96CD0 374 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 CXorf40BQ96DE9 158 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 L3HYPDHQ96EM0 354 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 MED8Q96G25 268 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 CCDC138Q96M89 665 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 SORT1Q99523 831 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 CD244Q9BZW8 370 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 CCDC134Q9H6E4 229 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 CAPN10Q9HC96 672 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 ZBTB26Q9HCK0 441 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 TNFRSF12AQ9NP84 129 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 SEMA4BQ9NPR2 832 aaPredicted RBP9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 WASH6PQ9NQA3 447 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 INTS7Q9NVH2 962 aaKnown RBP9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 FGFR1OP2Q9NVK5 253 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 PCTPQ9UKL6 214 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 DOLKQ9UPQ8 538 aa9.46□□□□□ -0.9
SNRNP40-201ENST00000263694 SNRNP200O75643 2136 aaKnown RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 PCDH15Q96QU1 1955 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 CCDC189A1A4V9 331 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 STX16-NPEPL1H3BU86 382 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 MYO1CO00159 1063 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 E2F3O00716 465 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 STX16O14662 325 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 SHOX2O60902 331 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 SNNO75324 88 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 STK16O75716 305 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 RPS17P08708 135 aaKnown RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 KITP10721 976 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 MPSTP25325 297 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms