RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PARVBQ9HBI1 364 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 CFAP99D6REC4 459 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 WNT9AO14904 365 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 BCAS2O75934 225 aaPredicted RBP13.25□□□□□ -0.29
VMP1-201ENST00000262291 RECQL5O94762 991 aaPredicted RBP13.25□□□□□ -0.29
VMP1-201ENST00000262291 EPHX1P07099 455 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 TFPTP0C1Z6 253 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 PSMD7P51665 324 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 POLR2JP52435 117 aaKnown RBP13.25□□□□□ -0.29
VMP1-201ENST00000262291 SYTL3Q4VX76 610 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 PDE12Q6L8Q7 609 aaKnown RBP13.25□□□□□ -0.29
VMP1-201ENST00000262291 UGT2A3Q6UWM9 527 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 SPATA19Q7Z5L4 167 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 TRAM1L1Q8N609 369 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 PROKR1Q8TCW9 393 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 GLYATL1Q969I3 302 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 FAM129BQ96TA1 746 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 PKP2Q99959 881 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 SLC52A3Q9NQ40 469 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 INTS7Q9NVH2 962 aaKnown RBP13.25□□□□□ -0.29
VMP1-201ENST00000262291 CMTM6Q9NX76 183 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 HCN2Q9UL51 889 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 ST14Q9Y5Y6 855 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 DOCK9Q9BZ29 2069 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 CCDC154A6NI56 674 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 PRAMEF4O60810 478 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 VPS4BO75351 444 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 HIST1H2AGP0C0S8 130 aaPredicted RBP13.24□□□□□ -0.29
VMP1-201ENST00000262291 TCF3P15923 654 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 HIST1H2ADP20671 130 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 SLC5A2P31639 672 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 FOLH1Q04609 750 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 TMEM115Q12893 351 aaPredicted RBP13.24□□□□□ -0.29
VMP1-201ENST00000262291 TRIM25Q14258 630 aaKnown RBP13.24□□□□□ -0.29
VMP1-201ENST00000262291 HNRNPA1L2Q32P51 320 aaKnown RBP13.24□□□□□ -0.29
VMP1-201ENST00000262291 MAP7D1Q3KQU3 841 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 PRAMEF9Q5VWM5 478 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 EGFLAMQ63HQ2 1017 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 OGFOD2Q6N063 350 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 IYDQ6PHW0 289 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 CRTC3Q6UUV7 619 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 CYP20A1Q6UW02 462 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 ARMCX6Q7L4S7 300 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 PLPP6Q8IY26 295 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 PCYOX1LQ8NBM8 494 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 LRRC58Q96CX6 371 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 HIST1H2AHQ96KK5 128 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 HIST1H2AJQ99878 128 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 H2AFJQ9BTM1 129 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 OR2AG1Q9H205 316 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 ACTL8Q9H568 366 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 TMEM181Q9P2C4 612 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 WDR37Q9Y2I8 494 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 SLC27A6Q9Y2P4 619 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 KIF26AQ9ULI4 1882 aaPredicted RBP13.24□□□□□ -0.29
VMP1-201ENST00000262291 ZNF839A8K0R7 811 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 MANBAO00462 879 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 LZTS3O60299 673 aaPredicted RBP13.24□□□□□ -0.29
VMP1-201ENST00000262291 ULK1O75385 1050 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 TLR1Q15399 786 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 SF1Q15637 639 aaKnown RBP13.24□□□□□ -0.29
VMP1-201ENST00000262291 IMPG1Q17R60 797 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.24□□□□□ -0.29
VMP1-201ENST00000262291 C6orf10Q5SRN2 563 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 RAET1GQ6H3X3 334 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 DOK6Q6PKX4 331 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 EFL1Q7Z2Z2 1120 aaKnown RBP13.24□□□□□ -0.29
VMP1-201ENST00000262291 SLC15A3Q8IY34 581 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 RGL4Q8IZJ4 473 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 KRTCAP2Q8N6L1 136 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 WFIKKN2Q8TEU8 576 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 OR8D1Q8WZ84 308 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 MED8Q96G25 268 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 UBAP1Q9NZ09 502 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 LRRK1Q38SD2 2015 aa13.24□□□□□ -0.29
VMP1-201ENST00000262291 CXorf51AA0A1B0GTR3 108 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 TSPAN11A1L157 253 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 PRR23AA6NEV1 266 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 ARHGEF33A8MVX0 844 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 H3BSA7 217 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 SEC22BO75396 215 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 RNASEH2AO75792 299 aaKnown RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 PDYNP01213 254 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 C6P13671 934 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 NCK1P16333 377 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 ATP6V1B2P21281 511 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 OPRD1P41143 372 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 RPL5P46777 297 aaKnown RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 CD97P48960 835 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 SEC13P55735 322 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 ZDHHC20Q5W0Z9 365 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 RALGPS2Q86X27 583 aaPredicted RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 TERB1Q8NA31 727 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 ABHD8Q96I13 439 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 PPM1MQ96MI6 270 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 MYADMQ96S97 322 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 NRTNQ99748 197 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 ZSCAN5AQ9BUG6 496 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 SLC12A9Q9BXP2 914 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms