RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 FEVQ99581 238 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 SERINC1Q9NRX5 453 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 TAAR2Q9P1P5 351 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 PADI2Q9Y2J8 665 aa4.12□□□□□ -1.75
CCDC54-201ENST00000261058 A0A1W2PRB8 838 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 NEMP2A6NFY4 417 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 TRIM64CA6NLI5 447 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 PRSS44E7EML9 344 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 CPLX1O14810 134 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 TSHBP01222 138 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 CRYAAP02489 173 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 ATP5BP06576 529 aaKnown RBP4.11□□□□□ -1.75
CCDC54-201ENST00000261058 IGHV4-38-2P0DP08 117 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 PTAFRP25105 342 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 CCR10P46092 362 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 DVL1P1P54792 670 aaPredicted RBP4.11□□□□□ -1.75
CCDC54-201ENST00000261058 CX3CL1P78423 397 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 MAP2K1Q02750 393 aaPredicted RBP4.11□□□□□ -1.75
CCDC54-201ENST00000261058 TFCP2Q12800 502 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 PPIGQ13427 754 aaKnown RBP eCLIP4.11□□□□□ -1.75
CCDC54-201ENST00000261058 ZNF273Q14593 569 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 TECRLQ5HYJ1 363 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 GDPD4Q6W3E5 623 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 ERN2Q76MJ5 926 aaKnown RBP4.11□□□□□ -1.75
CCDC54-201ENST00000261058 NUDT13Q86X67 352 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 COMMD2Q86X83 199 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 ARL10Q8N8L6 244 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 OR8H1Q8NGG4 311 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 SSMEM1Q8WWF3 244 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 ROBO4Q8WZ75 1007 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 TBC1D31Q96DN5 1066 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 MYADMQ96S97 322 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 ADPGKQ9BRR6 497 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 KRTAP1-5Q9BYS1 174 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 PCDH11YQ9BZA8 1340 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 YY1AP1Q9H869 796 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 RBM28Q9NW13 759 aaKnown RBP4.11□□□□□ -1.75
CCDC54-201ENST00000261058 KIAA1210Q9ULL0 1709 aa4.11□□□□□ -1.75
CCDC54-201ENST00000261058 PA2G4Q9UQ80 394 aaKnown RBP4.11□□□□□ -1.75
CCDC54-201ENST00000261058 A0A1W2PN81 502 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 TRIM64A6NGJ6 449 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 TRIM64BA6NI03 449 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 SLC22A2O15244 555 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 ATP1A1P05023 1023 aaKnown RBP4.1□□□□□ -1.75
CCDC54-201ENST00000261058 OR52Z1P0C646 297 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 LIFP15018 202 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 ERCC2P18074 760 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 KIF5BP33176 963 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 TIMP3P35625 211 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 CHRNA7P36544 502 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 LHX1P48742 406 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 B3GALT5-AS1P59052 145 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 BPIFB3P59826 476 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 POLR2LP62875 67 aaKnown RBP4.1□□□□□ -1.75
CCDC54-201ENST00000261058 CAMK2DQ13557 499 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 ITGA7Q13683 1181 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 RBBP5Q15291 538 aaKnown RBP4.1□□□□□ -1.75
CCDC54-201ENST00000261058 WDR38Q5JTN6 314 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 ZNF449Q6P9G9 518 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 IL27RAQ6UWB1 636 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 MARK2Q7KZI7 788 aaKnown RBP4.1□□□□□ -1.75
CCDC54-201ENST00000261058 FOXP4Q8IVH2 680 aaPredicted RBP4.1□□□□□ -1.75
CCDC54-201ENST00000261058 CAMKVQ8NCB2 501 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 IRGQQ8WZA9 623 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 IWS1Q96ST2 819 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 CPNE1Q99829 537 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 RTP3Q9BQQ7 232 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 COQ3Q9NZJ6 369 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 STK26Q9P289 416 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 XPO7Q9UIA9 1087 aaKnown RBP4.1□□□□□ -1.75
CCDC54-201ENST00000261058 FAF1Q9UNN5 650 aaPredicted RBP4.1□□□□□ -1.75
CCDC54-201ENST00000261058 PROCRQ9UNN8 238 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 TRIM17Q9Y577 477 aa4.1□□□□□ -1.75
CCDC54-201ENST00000261058 CLDN4O14493 209 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 MEIS2O14770 477 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 FGF17O60258 216 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 IGLV2-11P01706 119 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 CSN3P07498 182 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 TPM2P07951 284 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 ATP6V1B1P15313 513 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 IFNAR1P17181 557 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 CD22P20273 847 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 HOXC8P31273 242 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 TDO2P48775 406 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 LGALS3BPQ08380 585 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 TNIP1Q15025 636 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 CA9Q16790 459 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 ZC2HC1CQ53FD0 456 aaPredicted RBP4.09□□□□□ -1.75
CCDC54-201ENST00000261058 DNAJC21Q5F1R6 531 aaKnown RBP4.09□□□□□ -1.75
CCDC54-201ENST00000261058 MFSD12Q6NUT3 480 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 CORO6Q6QEF8 472 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 SUSD1Q6UWL2 747 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 DET1Q7L5Y6 550 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 ZNF554Q86TJ5 538 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 LMNTD1Q8N9Z9 388 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 MSANTD4Q8NCY6 345 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 KIF18AQ8NI77 898 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 CCDC107Q8WV48 283 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 FCAMRQ8WWV6 532 aa4.09□□□□□ -1.75
CCDC54-201ENST00000261058 MRPS27Q92552 414 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms