RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SIX2Q9NPC8 291 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 MARK1Q9P0L2 795 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 RWDD3Q9Y3V2 267 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF208O43345 1280 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 PRDX6P30041 224 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 CCKBRP32239 447 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 MLLT3P42568 568 aaPredicted RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 RAB2AP61019 212 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 SLC10A7Q0GE19 358 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 AMZ2Q86W34 360 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 RAB43Q86YS6 212 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 BANPQ8N9N5 519 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 NSMCE3Q96MG7 304 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 PCDHAC1Q9H158 963 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 INTS10Q9NVR2 710 aaKnown RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 LGALS13Q9UHV8 139 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 TLR6Q9Y2C9 796 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 FKBP7Q9Y680 259 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 WRBO00258 174 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 EOMESO95936 686 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 E2F2Q14209 437 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 TOR1AIP1Q5JTV8 583 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 SIRPB2Q5JXA9 342 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 LAPTM4BQ86VI4 370 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 SVOPLQ8N434 492 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ROPN1LQ96C74 230 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 CHIAQ9BZP6 476 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 EURLQ9NYK6 297 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 AFDNP55196 1824 aaKnown RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 PPEF2O14830 753 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 TULP3O75386 442 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 CFIP05156 583 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 OLIG2Q13516 323 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 SLBPQ14493 270 aaKnown RBP eCLIP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ZFP69Q49AA0 526 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 KHDC1Q4VXA5 237 aaKnown RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 CRTC2Q53ET0 693 aaPredicted RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 KIAA1161Q6NSJ0 714 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 OLFML1Q6UWY5 402 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF554Q86TJ5 538 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 PIM3Q86V86 326 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ADAP2Q9NPF8 381 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 XPNPEP1Q9NQW7 623 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 SNTG1Q9NSN8 517 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 HCN3Q9P1Z3 774 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 RPL26L1Q9UNX3 145 aaKnown RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 HEBP2Q9Y5Z4 205 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 CPED1A4D0V7 1026 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 SNX4O95219 450 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ARCN1P48444 511 aaKnown RBP11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ALDH3A2P51648 485 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 GMFBP60983 142 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 VBP1P61758 197 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 HMGCS1Q01581 520 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 NCBP2-AS2Q69YL0 99 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 SLC9A4Q6AI14 798 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 PLET1Q6UQ28 207 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ARMCX6Q7L4S7 300 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ARMC10Q8N2F6 343 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 NAT14Q8WUY8 206 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 EFHD2Q96C19 240 aaPredicted RBP11.86□□□□□ -0.51
COL8A1-201ENST00000261037 NODALQ96S42 347 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 DPYSL5Q9BPU6 564 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 SPATA9Q9BWV2 254 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 MED28Q9H204 178 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 PPM1HQ9ULR3 514 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ATRNL1Q5VV63 1379 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 NALCNQ8IZF0 1738 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
COL8A1-201ENST00000261037 NDUFS4O43181 175 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 TRMUO75648 421 aaKnown RBP11.86□□□□□ -0.51
COL8A1-201ENST00000261037 PRPS2P11908 318 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 OGNP20774 298 aaKnown RBP11.86□□□□□ -0.51
COL8A1-201ENST00000261037 PRR23BQ6ZRT6 265 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF627Q7L945 461 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 DHRS1Q96LJ7 313 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 CALML5Q9NZT1 146 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 J3KR12 359 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 TMEM63AO94886 807 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 UBXN7O94888 489 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 INMTO95050 263 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 IL1R2P27930 398 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 CCR3P51677 355 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 CREB5Q02930 508 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 HNRNPDQ14103 355 aaKnown RBP11.86□□□□□ -0.51
COL8A1-201ENST00000261037 GPR68Q15743 365 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF311Q5JNZ3 666 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ALG1LQ6GMV1 187 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 PAQR3Q6TCH7 311 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 GDPD4Q6W3E5 623 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 NUP54Q7Z3B4 507 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 CTU1Q7Z7A3 348 aaKnown RBP11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ZZZ3Q8IYH5 903 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 RFKQ969G6 155 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 SP140LQ9H930 580 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 GRHL1Q9NZI5 618 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 IGSF9Q9P2J2 1179 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 SLC2A6Q9UGQ3 507 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 SIX3O95343 332 aaPredicted RBP11.86□□□□□ -0.51
COL8A1-201ENST00000261037 OPN1SWP03999 348 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms