RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ARPINQ7Z6K5 226 aa8.89□□□□□ -0.99
CKAP2-201ENST00000258607 ADAMTSL2Q86TH1 951 aa8.89□□□□□ -0.99
CKAP2-201ENST00000258607 SYT12Q8IV01 421 aa8.89□□□□□ -0.99
CKAP2-201ENST00000258607 HIC2Q96JB3 615 aa8.89□□□□□ -0.99
CKAP2-201ENST00000258607 ZBTB18Q99592 522 aa8.89□□□□□ -0.99
CKAP2-201ENST00000258607 DERL2Q9GZP9 239 aa8.89□□□□□ -0.99
CKAP2-201ENST00000258607 TFB2MQ9H5Q4 396 aaKnown RBP8.89□□□□□ -0.99
CKAP2-201ENST00000258607 SPATS2LQ9NUQ6 558 aaKnown RBP8.89□□□□□ -0.99
CKAP2-201ENST00000258607 VAPAQ9P0L0 249 aa8.89□□□□□ -0.99
CKAP2-201ENST00000258607 DHRS7Q9Y394 339 aa8.89□□□□□ -0.99
CKAP2-201ENST00000258607 TBC1D3DA0A087WVF3 549 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TBC1D3IA0A087WXS9 549 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TBC1D3EA0A087X179 549 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TBC1D3KA0A087X1G2 549 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 DHRS12A0PJE2 317 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TBC1D3FA6NER0 549 aaPredicted RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 IGLON5A6NGN9 336 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TBC1D3LB9A6J9 549 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 CFAP99D6REC4 459 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 SLCO1B7G3V0H7 640 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 OR7A17O14581 309 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 H2AFYO75367 372 aaKnown RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 PAPSS2O95340 614 aaPredicted RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 EPOP01588 193 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 CYP17A1P05093 508 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 ATP5BP06576 529 aaKnown RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TBC1D3HP0C7X1 549 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 HSPA8P11142 646 aaKnown RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 PLA2G16P53816 162 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 ZNF33AQ06730 810 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 CAMK1Q14012 370 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 C16orf72Q14CZ0 275 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 UGT3A2Q3SY77 523 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 PIGGQ5H8A4 983 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TBC1D3GQ6DHY5 549 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TBC1D3CQ6IPX1 549 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 CYP2U1Q7Z449 544 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 ADIPOR2Q86V24 386 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TBC1D3Q8IZP1 549 aaPredicted RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 C2orf15Q8WU43 125 aaKnown RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 KCNJ9Q92806 393 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 SAMD11Q96NU1 681 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 YIPF4Q9BSR8 244 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 NKX2-4Q9H2Z4 354 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 SMURF2Q9HAU4 748 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 RIC8BQ9NVN3 520 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 NDRG2Q9UN36 371 aaKnown RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 OR51B4Q9Y5P0 310 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 ARHGEF17Q96PE2 2063 aaPredicted RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 ASPMQ8IZT6 3477 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 H0Y8X5 98 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 H3BM21 787 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 GAPDHSO14556 408 aaPredicted RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 ARPC2O15144 300 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 PPM1DO15297 605 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 C9P02748 559 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 POLR2IP36954 125 aaKnown RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 SPINT3P49223 89 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 RAP1GDS1P52306 607 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 CLDN2P57739 230 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 ATP6V0D1P61421 351 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TMEM115Q12893 351 aaPredicted RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 GLYATQ6IB77 296 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 NANOGP8Q6NSW7 305 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 ZCCHC8Q6NZY4 707 aaKnown RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 NEK5Q6P3R8 708 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 KIAA1324Q6UXG2 1013 aaKnown RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 GPR150Q8NGU9 434 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 FIBINQ8TAL6 211 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 MCOLN3Q8TDD5 553 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 PPP1R2P1Q96PQ5 205 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 TSC22D3Q99576 134 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 NANOGQ9H9S0 305 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 LRTM1Q9HBL6 345 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 INTS10Q9NVR2 710 aaKnown RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 CLDND1Q9NY35 253 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 GPRC5BQ9NZH0 403 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 GPSM3Q9Y4H4 160 aa8.88□□□□□ -0.99
CKAP2-201ENST00000258607 PCYT1BQ9Y5K3 369 aaPredicted RBP8.88□□□□□ -0.99
CKAP2-201ENST00000258607 SOCS2O14508 198 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 MID1O15344 667 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 COX7A2P14406 83 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 ATP1B2P14415 290 aaPredicted RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 GPX3P22352 226 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 HTR7P34969 479 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 TBCCQ15814 346 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 GRAMD4Q6IC98 578 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 ENPP6Q6UWR7 440 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 KIAA2013Q8IYS2 634 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 CRIPAKQ8N1N5 446 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 SCML4Q8N228 414 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 C10orf111Q8N326 155 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 MIEF2Q96C03 454 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 SCRN2Q96FV2 425 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 ZNF599Q96NL3 588 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 LGR4Q9BXB1 951 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 RHBGQ9H310 441 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 RC3H2Q9HBD1 1191 aaKnown RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 SGK2Q9HBY8 427 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 SERGEFQ9UGK8 458 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms