RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SDCCAG3Q96C92 435 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 AURKBQ96GD4 344 aaPredicted RBP16.63■□□□□ 0.25
FOXA1-201ENST00000250448 GPR21Q99679 349 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 FEM1AQ9BSK4 669 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 LINC00597Q9H2U6 94 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 WARS2Q9UGM6 360 aaKnown RBP16.63■□□□□ 0.25
FOXA1-201ENST00000250448 RIMKLBQ9ULI2 386 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 WDR37Q9Y2I8 494 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 FCF1Q9Y324 198 aaKnown RBP16.63■□□□□ 0.25
FOXA1-201ENST00000250448 OR4F21O95013 312 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 NFKBIAP25963 317 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 NRIP1P48552 1158 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 AQP6Q13520 282 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 SPCS2Q15005 226 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 PTPRRQ15256 657 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 IMPG1Q17R60 797 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 HTR3DQ70Z44 454 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 ZDHHC13Q8IUH4 622 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 CHDHQ8NE62 594 aaPredicted RBP16.63■□□□□ 0.25
FOXA1-201ENST00000250448 CDKN2AIPNLQ96HQ2 116 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 CGREF1Q99674 301 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 EIF2B4Q9UI10 523 aaKnown RBP16.63■□□□□ 0.25
FOXA1-201ENST00000250448 ITM2BQ9Y287 266 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 PCDHGA8Q9Y5G5 932 aa16.63■□□□□ 0.25
FOXA1-201ENST00000250448 GFRA2O00451 464 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 HTR1AP08908 422 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 CEBPBP17676 345 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 OPRL1P41146 370 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 CYP2A13Q16696 494 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 LDLRAP1Q5SW96 308 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 TMCO5AQ8N6Q1 288 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 CDYL2Q8N8U2 506 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 OR6K2Q8NGY2 324 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 FKBP10Q96AY3 582 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 ZNF707Q96C28 371 aaPredicted RBP16.62■□□□□ 0.25
FOXA1-201ENST00000250448 ITPKCQ96DU7 683 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 MBOAT4Q96T53 435 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 FUNDC2Q9BWH2 189 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 HEBP1Q9NRV9 189 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 FAM118AQ9NWS6 357 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 GALPQ9UBC7 116 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 PDE10AQ9Y233 779 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 A0A0U1RQS6 177 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 RB1P06400 928 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 C6orf141Q5SZD1 244 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 TMEM25Q86YD3 366 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 NKAPQ8N5F7 415 aaKnown RBP16.62■□□□□ 0.25
FOXA1-201ENST00000250448 DCBLD1Q8N8Z6 715 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 ZNF555Q8NEP9 628 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 MYLIPQ8WY64 445 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 MUL1Q969V5 352 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 ESAMQ96AP7 390 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 CARS2Q9HA77 564 aaKnown RBP16.62■□□□□ 0.25
FOXA1-201ENST00000250448 SMURF2Q9HAU4 748 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 VPS51Q9UID3 782 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 PCDHGC4Q9Y5F7 938 aa16.62■□□□□ 0.25
FOXA1-201ENST00000250448 G3V2T6 193 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 JAK1P23458 1154 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 CD70P32970 193 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 IDUAP35475 653 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 EPS8Q12929 822 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 TRIM16LQ309B1 348 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 ATXN7L2Q5T6C5 722 aaPredicted RBP16.61■□□□□ 0.25
FOXA1-201ENST00000250448 SULT1C3Q6IMI6 304 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 CRTC3Q6UUV7 619 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 SLC16A12Q6ZSM3 486 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
FOXA1-201ENST00000250448 ZNF347Q96SE7 839 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 TM6SF2Q9BZW4 377 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 IGFLR1Q9H665 355 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 ASB1Q9Y576 335 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 DGKBQ9Y6T7 804 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 PRUNE2Q8WUY3 3088 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 ARNTLO00327 626 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 KPNA4O00629 521 aaPredicted RBP16.61■□□□□ 0.25
FOXA1-201ENST00000250448 BCAS1O75363 584 aaPredicted RBP16.61■□□□□ 0.25
FOXA1-201ENST00000250448 NDUFS3O75489 264 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 GMNNO75496 209 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 EPOP01588 193 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 IST1P53990 364 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 ERVK-21P61565 698 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 MEP1AQ16819 746 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 Q6ZSR9 355 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 PARP8Q8N3A8 854 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 FAM86B1Q8N7N1 296 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 CCDC138Q96M89 665 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 ZNF382Q96SR6 550 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 DGCR6LQ9BY27 220 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 AMBRA1Q9C0C7 1298 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 LTB4R2Q9NPC1 389 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 ENPP5Q9UJA9 477 aa16.61■□□□□ 0.25
FOXA1-201ENST00000250448 SPTBN5Q9NRC6 3674 aaKnown RBP16.61■□□□□ 0.25
FOXA1-201ENST00000250448 ZNF140P52738 457 aaPredicted RBP16.6■□□□□ 0.25
FOXA1-201ENST00000250448 HK3P52790 923 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 PWP1Q13610 501 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 ZNF846Q147U1 533 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 CTU2Q2VPK5 515 aaKnown RBP16.6■□□□□ 0.25
FOXA1-201ENST00000250448 AFTPHQ6ULP2 937 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 PJA1Q8NG27 643 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 CCDC115Q96NT0 180 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms