RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CRB2Q5IJ48 1285 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 GLT6D1Q7Z4J2 308 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 TRIM73Q86UV7 250 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 CFAP206Q8IYR0 622 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 CCDC89Q8N998 374 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 ST6GALNAC3Q8NDV1 305 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 GRHL3Q8TE85 626 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 LCN9Q8WX39 176 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 XKR8Q9H6D3 395 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 C1GALT1Q9NS00 363 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 IRAK4Q9NWZ3 460 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 PCYOX1Q9UHG3 505 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 ENTPD4Q9Y227 616 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 BTN3A3O00478 584 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 BTN3A1O00481 513 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 MAP3K7O43318 606 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 KLF7O75840 302 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-201ENST00000242776 CTSBP07858 339 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 PER3P56645 1201 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 DHX34Q14147 1143 aaKnown RBP13.34□□□□□ -0.27
DDX39A-201ENST00000242776 SSPNQ14714 243 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 CYP2A13Q16696 494 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 P3H1Q32P28 736 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 SIRPB2Q5JXA9 342 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 Q6ZS92 163 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 CDHR3Q6ZTQ4 885 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 MAATS1Q7Z4T9 603 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 KLHL7Q8IXQ5 586 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 PHC3Q8NDX5 983 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 DDHD1Q8NEL9 900 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 TM9SF4Q92544 642 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 TRAPPC9Q96Q05 1148 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 CARD6Q9BX69 1037 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 SPRTNQ9H040 489 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-201ENST00000242776 KLHL8Q9P2G9 620 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-201ENST00000242776 IFT80Q9P2H3 777 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-201ENST00000242776 DHCR7Q9UBM7 475 aaKnown RBP13.34□□□□□ -0.27
DDX39A-201ENST00000242776 NDOR1Q9UHB4 597 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 TRHDEQ9UKU6 1024 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 NOVA2Q9UNW9 492 aaKnown RBP13.34□□□□□ -0.27
DDX39A-201ENST00000242776 COLEC10Q9Y6Z7 277 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 F8P00451 2351 aa13.34□□□□□ -0.27
DDX39A-201ENST00000242776 CNTRLQ7Z7A1 2325 aa13.33□□□□□ -0.27
DDX39A-201ENST00000242776 SNRNP200O75643 2136 aaKnown RBP13.33□□□□□ -0.27
DDX39A-201ENST00000242776 MGAT4DA6NG13 374 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 GAPDHSO14556 408 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-201ENST00000242776 IFNB1P01574 187 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 PTPN3P26045 913 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 HMGCLP35914 325 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 KCNJ1P48048 391 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 WNT3AP56704 352 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 PRKG2Q13237 762 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 TEX44Q53QW1 395 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 ZNF385CQ66K41 422 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-201ENST00000242776 ITPRIPL1Q6GPH6 555 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 C4orf22Q6V702 233 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 SYDE1Q6ZW31 735 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-201ENST00000242776 GPR135Q8IZ08 494 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 FAM71DQ8N9W8 422 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 OR2L2Q8NH16 312 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 SLCO2A1Q92959 643 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 TADA1Q96BN2 335 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 GBP5Q96PP8 586 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 PPP1R2P1Q96PQ5 205 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 KRT12Q99456 494 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 IL17CQ9P0M4 197 aa13.33□□□□□ -0.28
DDX39A-201ENST00000242776 DNMT3AQ9Y6K1 912 aaPredicted RBP13.33□□□□□ -0.28
DDX39A-201ENST00000242776 CSMD2Q7Z408 3487 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 C5orf60A6NFR6 353 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 E2F3O00716 465 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 HCRTR1O43613 425 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 CNOT3O75175 753 aaKnown RBP13.32□□□□□ -0.28
DDX39A-201ENST00000242776 NFKB1P19838 968 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 DR1Q01658 176 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 CDC16Q13042 620 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 ITGA9Q13797 1035 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 PPP1R7Q15435 360 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 C8orf74Q6P047 294 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 TTC27Q6P3X3 843 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 IGFL3Q6UXB1 125 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 ARHGEF18Q6ZSZ5 1173 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 MICALCLQ6ZW33 695 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 PPP1R32Q7Z5V6 425 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 HOOK3Q86VS8 718 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 ACVR1CQ8NER5 493 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 IPMKQ8NFU5 416 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 DNAJB14Q8TBM8 379 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 ZNF398Q8TD17 642 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 SPATA13Q96N96 652 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 WDR77Q9BQA1 342 aaPredicted RBP13.32□□□□□ -0.28
DDX39A-201ENST00000242776 HGH1Q9BTY7 390 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 DHRS4Q9BTZ2 278 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 C10orf88Q9H8K7 445 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 FAM60AQ9NP50 221 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 ATP13A2Q9NQ11 1180 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 PAK5Q9P286 719 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 COPG2Q9UBF2 871 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 ACSL5Q9ULC5 683 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 PKP3Q9Y446 797 aa13.32□□□□□ -0.28
DDX39A-201ENST00000242776 PCM1Q15154 2024 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms