RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 EBF4Q9BQW3 602 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 NTMT1Q9BV86 223 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 C1QTNF2Q9BXJ5 285 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 SLC29A3Q9BZD2 475 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 MID1IP1Q9NPA3 183 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 RIC8BQ9NVN3 520 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 CD84Q9UIB8 345 aa12.89□□□□□ -0.35
SLIRP-201ENST00000238688 CNOT6Q9ULM6 557 aaKnown RBP12.89□□□□□ -0.35
SLIRP-201ENST00000238688 FRYQ5TBA9 3013 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 IGF2RP11717 2491 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 C10orf142B7Z368 130 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 K7EPI3 171 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 SDHDO14521 159 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 CHUKO15111 745 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 MMP20O60882 483 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 STK16O75716 305 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 RPN2P04844 631 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 THRAP10827 490 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 CD59P13987 128 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 MAP4P27816 1152 aaKnown RBP12.88□□□□□ -0.35
SLIRP-201ENST00000238688 OXTRP30559 389 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 ACSL1P33121 698 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 CA5AP35218 305 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 TRIM23P36406 574 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 RPIAP49247 311 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 ACADVLP49748 655 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 SH3BP2P78314 561 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 HSPA14Q0VDF9 509 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 GGTA1PQ4G0N0 100 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 ZNF658BQ4V348 819 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-201ENST00000238688 PNCKQ6P2M8 343 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 ATG14Q6ZNE5 492 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 UBE2R2Q712K3 238 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-201ENST00000238688 OXR1Q8N573 874 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 MINDY1Q8N5J2 469 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 RASGEF1AQ8N9B8 481 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 TSPEARQ8WU66 669 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 FBXL8Q96CD0 374 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 CCDC138Q96M89 665 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 EGFL8Q99944 293 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 BTBD10Q9BSF8 475 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 HGH1Q9BTY7 390 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 TEX101Q9BY14 249 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 NUF2Q9BZD4 464 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 CD244Q9BZW8 370 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 UNKQ9C0B0 810 aaKnown RBP12.88□□□□□ -0.35
SLIRP-201ENST00000238688 PHPT1Q9NRX4 125 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-201ENST00000238688 DNAAF2Q9NVR5 837 aaKnown RBP12.88□□□□□ -0.35
SLIRP-201ENST00000238688 WWOXQ9NZC7 414 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 OPTCQ9UBM4 332 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 TRPS1Q9UHF7 1281 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 ITM2BQ9Y287 266 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 AKAP13Q12802 2813 aa12.88□□□□□ -0.35
SLIRP-201ENST00000238688 ARID1BQ8NFD5 2236 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-201ENST00000238688 PTPRBP23467 1997 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 MGAT4DA6NG13 374 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 PCDH8O95206 1070 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 EBLN1P0CF75 366 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 T-ENOLP0DO92 83 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 NQO1P15559 274 aaKnown RBP12.87□□□□□ -0.35
SLIRP-201ENST00000238688 EPB42P16452 691 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 HSD17B2P37059 387 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 HK3P52790 923 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 TAS2R38P59533 333 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 SEMG2Q02383 582 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 BTKQ06187 659 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 SGCGQ13326 291 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 RIPK1Q13546 671 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 GTF2H2Q13888 395 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 BOP1Q14137 746 aaKnown RBP12.87□□□□□ -0.35
SLIRP-201ENST00000238688 SQLEQ14534 574 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 GSTA3Q16772 222 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 LSM12Q3MHD2 195 aaKnown RBP12.87□□□□□ -0.35
SLIRP-201ENST00000238688 UGT3A2Q3SY77 523 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 POM121L1PQ3SYA9 428 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 TMEM259Q4ZIN3 620 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 SLC9B1Q4ZJI4 515 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 GTF2H2CQ6P1K8 395 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 UNC5DQ6UXZ4 953 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 SPATA19Q7Z5L4 167 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 RABEPKQ7Z6M1 372 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 ADGRG6Q86SQ4 1221 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 FAM124AQ86V42 546 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 TRIM69Q86WT6 500 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 RGL4Q8IZJ4 473 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 PELI3Q8N2H9 469 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 OR2L2Q8NH16 312 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 CFAP61Q8NHU2 1237 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 RP9Q8TA86 221 aaKnown RBP12.87□□□□□ -0.35
SLIRP-201ENST00000238688 LENG8Q96PV6 779 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-201ENST00000238688 ORAI3Q9BRQ5 295 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 GTPBP2Q9BX10 602 aaKnown RBP12.87□□□□□ -0.35
SLIRP-201ENST00000238688 SLC32A1Q9H598 525 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 ZNF385DQ9H6B1 395 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 C6orf106Q9H6K1 298 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-201ENST00000238688 FBXL12Q9NXK8 326 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 ARL15Q9NXU5 204 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 IKZF3Q9UKT9 509 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 ANGPTL2Q9UKU9 493 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms