RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 IGHV4-34P06331 123 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 CTSLP07711 333 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ATXN8OSP0DMR3 200 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 GNAZP19086 355 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 CD38P28907 300 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 RACK1P63244 317 aaKnown RBP8.47□□□□□ -1.05
VPS4B-201ENST00000238497 CEACAM7Q14002 265 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 SUZ12Q15022 739 aaKnown RBP8.47□□□□□ -1.05
VPS4B-201ENST00000238497 NR6A1Q15406 480 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 CPSF6Q16630 551 aaKnown RBP eCLIP8.47□□□□□ -1.05
VPS4B-201ENST00000238497 IYDQ6PHW0 289 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ERN2Q76MJ5 926 aaKnown RBP8.47□□□□□ -1.05
VPS4B-201ENST00000238497 CNTN4Q8IWV2 1026 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 CLYBLQ8N0X4 340 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 TEX26Q8N6G2 289 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 RP9Q8TA86 221 aaKnown RBP8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ARRDC3Q96B67 414 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 S100A14Q9HCY8 104 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ADAMTS6Q9UKP5 1117 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 FZD4Q9ULV1 537 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ZNF711Q9Y462 761 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 CKAP5Q14008 2032 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ANKRD11Q6UB99 2663 aaPredicted RBP8.47□□□□□ -1.05
VPS4B-201ENST00000238497 A0A0J9YYE9 177 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ARHGAP10A1A4S6 786 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 FAM149AA5PLN7 773 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 SLCO1B7G3V0H7 640 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 AKAP10O43572 662 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 PAK4O96013 591 aaPredicted RBP8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ITGALP20701 1170 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ME2P23368 584 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 HNF1BP35680 557 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 TTPAP49638 278 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 HERVK_113P63132 956 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 SGCGQ13326 291 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 CCNIQ14094 377 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 DBN1Q16643 649 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 OR6Y1Q8NGX8 325 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 CNBD2Q96M20 576 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 KLHL32Q96NJ5 620 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ZNF184Q99676 751 aaPredicted RBP8.47□□□□□ -1.05
VPS4B-201ENST00000238497 SPATA16Q9BXB7 569 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ERVK-6Q9BXR3 956 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ZDHHC5Q9C0B5 715 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 GSTO2Q9H4Y5 243 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 PDFQ9HBH1 243 aa8.47□□□□□ -1.05
VPS4B-201ENST00000238497 NLE1Q9NVX2 485 aaPredicted RBP8.47□□□□□ -1.05
VPS4B-201ENST00000238497 URB1O60287 2271 aaKnown RBP8.47□□□□□ -1.05
VPS4B-201ENST00000238497 ZNF839A8K0R7 811 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 TARM1B6A8C7 271 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 PRMT5O14744 637 aaPredicted RBP8.46□□□□□ -1.05
VPS4B-201ENST00000238497 WNT9AO14904 365 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 SEC24DO94855 1032 aaPredicted RBP8.46□□□□□ -1.05
VPS4B-201ENST00000238497 IGSF6O95976 241 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 IGLV3-19P01714 112 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 SNRPB2P08579 225 aaKnown RBP8.46□□□□□ -1.05
VPS4B-201ENST00000238497 CEACAM1P13688 526 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 PAX7P23759 505 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 CLDN2P57739 230 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 STX5Q13190 355 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 TRIP6Q15654 476 aaKnown RBP8.46□□□□□ -1.05
VPS4B-201ENST00000238497 IMPG1Q17R60 797 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 C5orf22Q49AR2 442 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 TIGD2Q4W5G0 525 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 SETMARQ53H47 684 aaPredicted RBP8.46□□□□□ -1.05
VPS4B-201ENST00000238497 ZNF542PQ5EBM4 170 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 BEND7Q8N7W2 519 aaPredicted RBP8.46□□□□□ -1.05
VPS4B-201ENST00000238497 LMNTD1Q8N9Z9 388 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 EME1Q96AY2 570 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 UBXN10Q96LJ8 280 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 SIKE1Q9BRV8 207 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 ATG10Q9H0Y0 220 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 ZBTB26Q9HCK0 441 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 KLQ9UEF7 1012 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 APPL1Q9UKG1 709 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 TRPM6Q9BX84 2022 aa8.46□□□□□ -1.05
VPS4B-201ENST00000238497 ENO4A6NNW6 628 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 HYAL3O43820 417 aaPredicted RBP8.46□□□□□ -1.06
VPS4B-201ENST00000238497 SLC2A4P14672 509 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 ATP6V1B1P15313 513 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 ZNF7P17097 686 aaPredicted RBP8.46□□□□□ -1.06
VPS4B-201ENST00000238497 CA5AP35218 305 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 GRIA3P42263 894 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 ARRB1P49407 418 aaPredicted RBP8.46□□□□□ -1.06
VPS4B-201ENST00000238497 AQP4P55087 323 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 HMGCS1Q01581 520 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 AGBL4Q5VU57 503 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 CAPRIN2Q6IMN6 1127 aaKnown RBP8.46□□□□□ -1.06
VPS4B-201ENST00000238497 DHDDSQ86SQ9 333 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 NAXDQ8IW45 347 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 MIER2Q8N344 545 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 CHCHD4Q8N4Q1 142 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 OR2AP1Q8NGE2 309 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 MAGEC3Q8TD91 643 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 LPGAT1Q92604 370 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 CNTNAP3BQ96NU0 1288 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 SEPHS2Q99611 448 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 CNTNAP3Q9BZ76 1288 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 PCED1AQ9H1Q7 454 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 STN1Q9H668 368 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms