RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SLC6A17Q9H1V8 727 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 LHX5Q9H2C1 402 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 hCG_1807616A0A1W2PRN6 198 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 LRRC14BA6NHZ5 514 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 E2F3O00716 465 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 NUDT6P53370 316 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 PSMA6P60900 246 aaKnown RBP12.63□□□□□ -0.39
VAMP4-201ENST00000236192 LCP2Q13094 533 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 GRK1Q15835 563 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 IRAK1BP1Q5VVH5 260 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 TIGD3Q6B0B8 471 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 LHFPL3Q86UP9 236 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 ADGRG5Q8IZF4 528 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 HERVK_113Q902F9 699 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 RFT1Q96AA3 541 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 SIGLEC10Q96LC7 697 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 ACTR6Q9GZN1 396 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 SRRDQ9UH36 339 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 CRYL1Q9Y2S2 319 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 OAS3Q9Y6K5 1087 aaKnown RBP12.63□□□□□ -0.39
VAMP4-201ENST00000236192 ANXA8P13928 327 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 KCNC1P48547 511 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 RNF149Q8NC42 400 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 OR52K2Q8NGK3 314 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 LHFPL5Q8TAF8 219 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 GAL3ST3Q96A11 431 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 SLC38A2Q96QD8 506 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 DPEP3Q9H4B8 488 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 ARHGAP28Q9P2N2 729 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 DNTTP04053 509 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 LCKP06239 509 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 UROSP10746 265 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 GRIA1P42261 906 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 CCR10P46092 362 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 CNTN1Q12860 1018 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 LRRC26Q2I0M4 334 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 FLYWCH1Q4VC44 716 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 FAM76BQ5HYJ3 339 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 C3P1Q6ZMU1 363 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 FAM183BPQ6ZVS7 135 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 GLB1L3Q8NCI6 653 aaPredicted RBP12.63□□□□□ -0.39
VAMP4-201ENST00000236192 B3GALNT2Q8NCR0 500 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 ZIM2Q9NZV7 527 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 ACTL7AQ9Y615 435 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 TEX46H3BTG2 121 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 TOXO94900 526 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 RPL17P18621 184 aaKnown RBP12.63□□□□□ -0.39
VAMP4-201ENST00000236192 SHMT2P34897 504 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 GPC1P35052 558 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 XRRA1Q6P2D8 792 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 INTS5Q6P9B9 1019 aaKnown RBP12.63□□□□□ -0.39
VAMP4-201ENST00000236192 PGAP1Q75T13 922 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 ING5Q8WYH8 240 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 PYURFQ96I23 114 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 C10orf90Q96M02 699 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 ERVK-6Q9BXR3 956 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 C3orf14Q9HBI5 128 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 IRAK3Q9Y616 596 aa12.63□□□□□ -0.39
VAMP4-201ENST00000236192 A0A1W2PPL8 197 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 NME4O00746 187 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 SERPINA3P01011 423 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 TCF3P15923 654 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 PRKAR1BP31321 381 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 GBX2P52951 348 aaPredicted RBP12.62□□□□□ -0.39
VAMP4-201ENST00000236192 DNAJB13P59910 316 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 GPLD1P80108 840 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 Q3ZCU0 254 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 ZRANB3Q5FWF4 1079 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 TSPAN33Q86UF1 283 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 PLD6Q8N2A8 252 aaKnown RBP12.62□□□□□ -0.39
VAMP4-201ENST00000236192 ZSCAN1Q8NBB4 408 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 TTLQ8NG68 377 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 DNAJB8Q8NHS0 232 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 HCAR2Q8TDS4 363 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 FYTTD1Q96QD9 318 aaKnown RBP12.62□□□□□ -0.39
VAMP4-201ENST00000236192 ENAMQ9NRM1 1142 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 SPIN1Q9Y657 262 aaPredicted RBP12.62□□□□□ -0.39
VAMP4-201ENST00000236192 TNFSF8P32971 234 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 IFNGR2P38484 337 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 SLC3A1Q07837 685 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 NOL9Q5SY16 702 aaKnown RBP12.62□□□□□ -0.39
VAMP4-201ENST00000236192 HECTD3Q5T447 861 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 BRAT1Q6PJG6 821 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 CYS1Q717R9 158 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 MIB1Q86YT6 1006 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 NKAPQ8N5F7 415 aaKnown RBP12.62□□□□□ -0.39
VAMP4-201ENST00000236192 MFSD3Q96ES6 412 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 PRDM12Q9H4Q4 367 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 CD300AQ9UGN4 299 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
VAMP4-201ENST00000236192 METTL15A6NJ78 407 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 PER2O15055 1255 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 BET1O15155 118 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 OIP5O43482 229 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 HMBSP08397 361 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 S100PP25815 95 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 NRLP54845 237 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 ST3GAL4Q11206 333 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 KLHL26Q53HC5 615 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms