RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 C11orf65Q8NCR3 313 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 TCEAL4Q96EI5 215 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 NDC1Q9BTX1 674 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 NIFKQ9BYG3 293 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 RBCK1Q9BYM8 510 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 NMUR1Q9HB89 426 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 PAQR5Q9NXK6 330 aaPredicted RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 KCNN3Q9UGI6 736 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 NFASCO94856 1347 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 GRM6O15303 877 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 NUPL2O15504 423 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 TOXO94900 526 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 RAB4AP20338 218 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 SPAM1P38567 509 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 NRLP54845 237 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 PPP3R1P63098 170 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 ERVK-8P63133 956 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 DEFA6Q01524 100 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 ARHGAP40Q5TG30 622 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 LIPMQ5VYY2 423 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 RFWD3Q6PCD5 774 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 FAM83AQ86UY5 434 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 SLC7A5P1Q8MH63 180 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 STK40Q8N2I9 435 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 OR10H4Q8NGA5 316 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 FTHL17Q9BXU8 183 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 TCF7L1Q9HCS4 588 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 hCG_1807616A0A1W2PRN6 198 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 LDOC1O95751 146 aaPredicted RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 IGKV5-2P06315 115 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 GNB3P16520 340 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 TFEBP19484 476 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 CLCN7P51798 805 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 PRKCZQ05513 592 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SEMA5AQ13591 1074 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 BMT2Q1RMZ1 405 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 RTL4Q6ZR62 310 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 ARCQ7LC44 396 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SDR16C5Q8N3Y7 309 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 ZMIZ2Q8NF64 920 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 OR5T1Q8NG75 326 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SLC16A10Q8TF71 515 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 ACOT12Q8WYK0 555 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 TMEM203Q969S6 136 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 CYP2S1Q96SQ9 504 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 C1orf109Q9NX04 203 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 TNPO3Q9Y5L0 923 aaKnown RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 ZNF726A6NNF4 738 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SLC16A5O15375 505 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 IDO1P14902 403 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 CDKN1CP49918 316 aaPredicted RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 ALG10Q5BKT4 473 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 PIAS4Q8N2W9 510 aaPredicted RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 OR2AJ1Q8NGZ0 328 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 PWWP2AQ96N64 755 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 PHOX2BQ99453 314 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 DPCDQ9BVM2 203 aaPredicted RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 TAPBPLQ9BX59 468 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 PCDHAC2Q9Y5I4 1007 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 RAB19A4D1S5 217 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 EFNA1P20827 205 aaPredicted RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 HTR2AP28223 471 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 CYP2C18P33260 490 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 HSPB3Q12988 150 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 ACBD4Q8NC06 268 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 OR14K1Q8NGZ2 314 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 LCN9Q8WX39 176 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 HOPXQ9BPY8 73 aaPredicted RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 DCSTAMPQ9H295 470 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 IFT80Q9P2H3 777 aaPredicted RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 CYP8B1Q9UNU6 501 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 ARID1BQ8NFD5 2236 aaPredicted RBP10.91□□□□□ -0.66
MSH6-201ENST00000234420 A0A1B0GV50 99 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 KLHL33A6NCF5 533 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 TTLL8A6PVC2 850 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SLC22A1O15245 554 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 F9P00740 461 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 IFNA21P01568 189 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 IRF2P14316 349 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 HSD11B1P28845 292 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 INHBEP58166 350 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 TRAPPC6BQ86SZ2 158 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 GPAT4Q86UL3 456 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 C1orf216Q8TAB5 229 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 YIPF4Q9BSR8 244 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SLC32A1Q9H598 525 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SPATA31A5Q5VU36 1347 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SPATA31A7Q8IWB4 1347 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 A0A1W2PPM1 405 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 CAPN14A8MX76 684 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 MED24O75448 989 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 COL6A1P12109 1028 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 DGKAP23743 735 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 HNF1BP35680 557 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 BRCC3P46736 316 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 CXCR3P49682 368 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 ODF4Q2M2E3 257 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 FBXO48Q5FWF7 155 aa10.91□□□□□ -0.66
MSH6-201ENST00000234420 SGMS1Q86VZ5 419 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms