RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 OR4F21O95013 312 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 RLN1P04808 185 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 DNAJA1P31689 397 aaKnown RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 CSKP41240 450 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 NCBP2P52298 156 aaKnown RBP eCLIP7.08□□□□□ -1.28
CPS1-201ENST00000233072 CDH13P55290 713 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 TAS2R43P59537 309 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 PPP2R2BQ00005 443 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 NFKB2Q00653 900 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 GBE1Q04446 702 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 UBE2Q1Q7Z7E8 422 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 GALNT5Q7Z7M9 940 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 GKN2Q86XP6 184 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 ECHDC2Q86YB7 292 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 ZDHHC21Q8IVQ6 265 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 PNLDC1Q8NA58 520 aaKnown RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 TMEM145Q8NBT3 493 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 OR5T3Q8NGG3 340 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 CLHC1Q8NHS4 586 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 KLHL32Q96NJ5 620 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 DGAT2Q96PD7 388 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 ERMAPQ96PL5 475 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 TTYH3Q9C0H2 523 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 NMUR2Q9GZQ4 415 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 TNKS2Q9H2K2 1166 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 PCDHB16Q9NRJ7 776 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 C19orf25Q9UFG5 118 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 EIF2B4Q9UI10 523 aaKnown RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 LRRC37A3O60309 1634 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 ZNF541Q9H0D2 1346 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 FAM240BA0A1B0GVZ2 78 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 SCAMP3O14828 347 aaKnown RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 ADH5P11766 374 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 CDH12P55289 794 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 LSM3P62310 102 aaKnown RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 TXNL4AP83876 142 aaKnown RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 ZNF548Q8NEK5 533 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 OR6K2Q8NGY2 324 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 SUN3Q8TAQ9 357 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 DNAJA4Q8WW22 397 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 EZH1Q92800 747 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 HPS1Q92902 700 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 C11orf24Q96F05 449 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 WDR55Q9H6Y2 383 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 SP140LQ9H930 580 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 CNOT6Q9ULM6 557 aaKnown RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 ELOA3DA6NLF2 546 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 VSTM5A8MXK1 200 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 PTGS2P35354 604 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 DSTNP60981 165 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 HSPB3Q12988 150 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 DUOXA1Q1HG43 343 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 SMU1Q2TAY7 513 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 ELOA3BQ3SY89 546 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 IQCCQ4KMZ1 466 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 AKIRIN2Q53H80 203 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 CDCA2Q69YH5 1023 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 SLC29A4Q7RTT9 530 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 TMEM126BQ8IUX1 230 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 ELOA3Q8NG57 546 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 OR2L5Q8NG80 312 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 C12orf66Q96MD2 445 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 PPM1MQ96MI6 270 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 IL12RB2Q99665 862 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 IFT27Q9BW83 186 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 SMOC2Q9H3U7 446 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 ACTL8Q9H568 366 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 DENND2DQ9H6A0 471 aaPredicted RBP7.08□□□□□ -1.28
CPS1-201ENST00000233072 OXSMQ9NWU1 459 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 PTTG2Q9NZH5 202 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 FZD1Q9UP38 647 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 FKBP7Q9Y680 259 aa7.08□□□□□ -1.28
CPS1-201ENST00000233072 SOWAHBA6NEL2 793 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 SLC16A5O15375 505 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 ATP6AP2O75787 350 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 CLUP10909 449 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 ENDOUP21128 410 aaKnown RBP7.07□□□□□ -1.28
CPS1-201ENST00000233072 SLC7A1P30825 629 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 RBM34P42696 430 aaKnown RBP7.07□□□□□ -1.28
CPS1-201ENST00000233072 HSDL1Q3SXM5 330 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 RFWD3Q6PCD5 774 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 PAOXQ6QHF9 649 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 RBM23Q86U06 439 aaKnown RBP7.07□□□□□ -1.28
CPS1-201ENST00000233072 SLC9B2Q86UD5 537 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 HDDC3Q8N4P3 179 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 CD99L2Q8TCZ2 262 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 CNDP2Q96KP4 475 aaKnown RBP7.07□□□□□ -1.28
CPS1-201ENST00000233072 PWWP2AQ96N64 755 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 ZNF570Q96NI8 536 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 WRAP53Q9BUR4 548 aaKnown RBP7.07□□□□□ -1.28
CPS1-201ENST00000233072 NEUROD4Q9HD90 331 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 PCDH10Q9P2E7 1040 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 A0A1W2PQ45 241 aaPredicted RBP7.07□□□□□ -1.28
CPS1-201ENST00000233072 A0A1W2PQY0 241 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 KLHL33A6NCF5 533 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 C9J4A7 227 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 ZNF670-ZNF695F2Z2N8 137 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 H0YGN5 161 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 GPR25O00155 361 aa7.07□□□□□ -1.28
CPS1-201ENST00000233072 KLF11O14901 512 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms