RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TDRKHQ9Y2W6 561 aaKnown RBP14.29□□□□□ -0.12
CNOT3-201ENST00000221232 PCDHGA8Q9Y5G5 932 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 C5orf42Q9H799 3197 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 A0A1W2PRU2 124 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 SLC28A1O00337 649 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 CLDN9O95484 217 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 ZNF682O95780 498 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 CDKN3Q16667 212 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 R3HCC1LQ7Z5L2 792 aaKnown RBP14.28□□□□□ -0.12
CNOT3-201ENST00000221232 NECAB2Q7Z6G3 386 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 FAM120BQ96EK7 910 aaKnown RBP14.28□□□□□ -0.12
CNOT3-201ENST00000221232 DGCR6LQ9BY27 220 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 ELOVL6Q9H5J4 265 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 C1orf109Q9NX04 203 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 CDH23Q9H251 3354 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 CHD5Q8TDI0 1954 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 THSD7BQ9C0I4 1608 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 NPPAP01160 153 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 ANXA5P08758 320 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 CYP4B1P13584 511 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 PFKLP17858 780 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 NAA20P61599 178 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 B4GALNT1Q00973 533 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 PON2Q15165 354 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 ANKRD26P1Q6NSI1 321 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 KLHL35Q6PF15 583 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 GAREM2Q75VX8 874 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 SCAMP4Q969E2 229 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 APIPQ96GX9 242 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 UGT2B28Q9BY64 529 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 MRPL17Q9NRX2 175 aaKnown RBP14.28□□□□□ -0.12
CNOT3-201ENST00000221232 INSL5Q9Y5Q6 135 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 MITFO75030 526 aaPredicted RBP14.28□□□□□ -0.12
CNOT3-201ENST00000221232 EPORP19235 508 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 LHCGRP22888 699 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 S100A3P33764 101 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 PTSQ03393 145 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 PTCHD3Q3KNS1 767 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 TBC1D25Q3MII6 688 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 C1QTNF12Q5T7M4 302 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 DEFB118Q96PH6 123 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 COPS8Q99627 209 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 MYOCQ99972 504 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 AMBRA1Q9C0C7 1298 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
CNOT3-201ENST00000221232 TUBA8Q9NY65 449 aaPredicted RBP14.28□□□□□ -0.12
CNOT3-201ENST00000221232 WARS2Q9UGM6 360 aaKnown RBP14.28□□□□□ -0.12
CNOT3-201ENST00000221232 IFRD1O00458 451 aaPredicted RBP14.27□□□□□ -0.12
CNOT3-201ENST00000221232 CREG1O75629 220 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 ZBTB11O95625 1053 aaPredicted RBP14.27□□□□□ -0.12
CNOT3-201ENST00000221232 IGSF6O95976 241 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 SOD2P04179 222 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 SERPINA4P29622 427 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 HALP42357 657 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 MRPL19P49406 292 aaKnown RBP14.27□□□□□ -0.12
CNOT3-201ENST00000221232 RPS14P62263 151 aaKnown RBP14.27□□□□□ -0.12
CNOT3-201ENST00000221232 SLC14A1Q13336 389 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 GTF2H3Q13889 308 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 SPATS1Q496A3 300 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 USP39Q53GS9 565 aaKnown RBP14.27□□□□□ -0.12
CNOT3-201ENST00000221232 OR4F3Q6IEY1 312 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 USP51Q70EK9 711 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 ZC3H7AQ8IWR0 971 aaKnown RBP14.27□□□□□ -0.12
CNOT3-201ENST00000221232 OR8J3Q8NGG0 315 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 MIPOL1Q8TD10 442 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 BARD1Q99728 777 aaKnown RBP14.27□□□□□ -0.12
CNOT3-201ENST00000221232 FAM118AQ9NWS6 357 aa14.27□□□□□ -0.12
CNOT3-201ENST00000221232 DNMT3BQ9UBC3 853 aaKnown RBP14.27□□□□□ -0.12
CNOT3-201ENST00000221232 TULP3O75386 442 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 EBLN1P0CF75 366 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 WEE1P30291 646 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 KCNAB2Q13303 367 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 PLEKHG6Q3KR16 790 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 RUNDC3AQ59EK9 446 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 GRAMD4Q6IC98 578 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 CES5AQ6NT32 575 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 DOK6Q6PKX4 331 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 LMNTD1Q8N9Z9 388 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 CHST14Q8NCH0 376 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 OR2AP1Q8NGE2 309 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 RETREG1Q9H6L5 497 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 IL21Q9HBE4 155 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 ZNF639Q9UID6 485 aa14.27□□□□□ -0.13
CNOT3-201ENST00000221232 SCN5AQ14524 2016 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 PIKFYVEQ9Y2I7 2098 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 OR2AG2A6NM03 316 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 MYO1GB0I1T2 1018 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 TEX28O15482 410 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 IL6P05231 212 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 RPS3P23396 243 aaKnown RBP eCLIP14.26□□□□□ -0.13
CNOT3-201ENST00000221232 FSHRP23945 695 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 MAP4P27816 1152 aaKnown RBP14.26□□□□□ -0.13
CNOT3-201ENST00000221232 CASP9P55211 416 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 NUP107P57740 925 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 TTLL9Q3SXZ7 439 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 LDLRAP1Q5SW96 308 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 NEK5Q6P3R8 708 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 MACC1Q6ZN28 852 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 THAP5Q7Z6K1 395 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 MICU2Q8IYU8 434 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms