RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CTPS1P17812 591 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 ITGB6P18564 788 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 MAGEA2P43356 314 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 KRT6CP48668 564 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 ACLYP53396 1101 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 SFSWAPQ12872 951 aaKnown RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 SLC44A4Q53GD3 710 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 CDKL4Q5MAI5 379 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 DCP2Q8IU60 420 aaKnown RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 TMEM132CQ8N3T6 1108 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 ABHD11Q8NFV4 315 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 PYURFQ96I23 114 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 REXO5Q96IC2 774 aaKnown RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 HTATIP2Q9BUP3 242 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 ARHGAP39Q9C0H5 1083 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 RMND5AQ9H871 391 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 ZFYVE1Q9HBF4 777 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 SERHLQ9NQF3 203 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 STOML2Q9UJZ1 356 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 PCDHB7Q9Y5E2 793 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 CORINQ9Y5Q5 1042 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 J3QRK9 145 aa13□□□□□ -0.33
SRP54-201ENST00000216774 WNT9AO14904 365 aa13□□□□□ -0.33
SRP54-201ENST00000216774 AREL1O15033 823 aa13□□□□□ -0.33
SRP54-201ENST00000216774 PER2O15055 1255 aa13□□□□□ -0.33
SRP54-201ENST00000216774 CLDN9O95484 217 aa13□□□□□ -0.33
SRP54-201ENST00000216774 HTR1BP28222 390 aa13□□□□□ -0.33
SRP54-201ENST00000216774 MZF1P28698 734 aaPredicted RBP13□□□□□ -0.33
SRP54-201ENST00000216774 HNRNPFP52597 415 aaKnown RBP13□□□□□ -0.33
SRP54-201ENST00000216774 CLDN8P56748 225 aa13□□□□□ -0.33
SRP54-201ENST00000216774 VAC14Q08AM6 782 aa13□□□□□ -0.33
SRP54-201ENST00000216774 SPCS2Q15005 226 aa13□□□□□ -0.33
SRP54-201ENST00000216774 ACOX1Q15067 660 aa13□□□□□ -0.33
SRP54-201ENST00000216774 TTLL9Q3SXZ7 439 aa13□□□□□ -0.33
SRP54-201ENST00000216774 GTDC1Q4AE62 458 aa13□□□□□ -0.33
SRP54-201ENST00000216774 SGO1Q5FBB7 561 aa13□□□□□ -0.33
SRP54-201ENST00000216774 ATXN7L2Q5T6C5 722 aaPredicted RBP13□□□□□ -0.33
SRP54-201ENST00000216774 NIPAL1Q6NVV3 410 aa13□□□□□ -0.33
SRP54-201ENST00000216774 SHQ1Q6PI26 577 aaKnown RBP13□□□□□ -0.33
SRP54-201ENST00000216774 PRSS55Q6UWB4 352 aaPredicted RBP13□□□□□ -0.33
SRP54-201ENST00000216774 LRRC8DQ7L1W4 858 aa13□□□□□ -0.33
SRP54-201ENST00000216774 TMEM179BQ7Z7N9 219 aa13□□□□□ -0.33
SRP54-201ENST00000216774 PHACTR4Q8IZ21 702 aa13□□□□□ -0.33
SRP54-201ENST00000216774 CLDN19Q8N6F1 224 aa13□□□□□ -0.33
SRP54-201ENST00000216774 SETD9Q8NE22 299 aa13□□□□□ -0.33
SRP54-201ENST00000216774 FBXO22Q8NEZ5 403 aa13□□□□□ -0.33
SRP54-201ENST00000216774 NETO1Q8TDF5 533 aa13□□□□□ -0.33
SRP54-201ENST00000216774 FBXL8Q96CD0 374 aa13□□□□□ -0.33
SRP54-201ENST00000216774 ITCHQ96J02 903 aa13□□□□□ -0.33
SRP54-201ENST00000216774 DGCR6LQ9BY27 220 aa13□□□□□ -0.33
SRP54-201ENST00000216774 GABARAPL1Q9H0R8 117 aa13□□□□□ -0.33
SRP54-201ENST00000216774 TNKS2Q9H2K2 1166 aa13□□□□□ -0.33
SRP54-201ENST00000216774 IL26Q9NPH9 171 aa13□□□□□ -0.33
SRP54-201ENST00000216774 TRPM5Q9NZQ8 1165 aa13□□□□□ -0.33
SRP54-201ENST00000216774 PRSS21Q9Y6M0 314 aa13□□□□□ -0.33
SRP54-201ENST00000216774 BCKDKO14874 412 aa13□□□□□ -0.33
SRP54-201ENST00000216774 STK16O75716 305 aa13□□□□□ -0.33
SRP54-201ENST00000216774 CBSLP0DN79 551 aa13□□□□□ -0.33
SRP54-201ENST00000216774 PRPS2P11908 318 aa13□□□□□ -0.33
SRP54-201ENST00000216774 HOXB9P17482 250 aaPredicted RBP13□□□□□ -0.33
SRP54-201ENST00000216774 AGXTP21549 392 aa13□□□□□ -0.33
SRP54-201ENST00000216774 S100A3P33764 101 aa13□□□□□ -0.33
SRP54-201ENST00000216774 CBSP35520 551 aa13□□□□□ -0.33
SRP54-201ENST00000216774 MLLT10P55197 1068 aa13□□□□□ -0.33
SRP54-201ENST00000216774 RPS14P62263 151 aaKnown RBP13□□□□□ -0.33
SRP54-201ENST00000216774 ABHD18Q0P651 414 aa13□□□□□ -0.33
SRP54-201ENST00000216774 AQP6Q13520 282 aa13□□□□□ -0.33
SRP54-201ENST00000216774 CTF1Q16619 201 aa13□□□□□ -0.33
SRP54-201ENST00000216774 GPR33Q49SQ1 333 aa13□□□□□ -0.33
SRP54-201ENST00000216774 SLC8B1Q6J4K2 584 aa13□□□□□ -0.33
SRP54-201ENST00000216774 DET1Q7L5Y6 550 aa13□□□□□ -0.33
SRP54-201ENST00000216774 RNF180Q86T96 592 aa13□□□□□ -0.33
SRP54-201ENST00000216774 CHPFQ8IZ52 775 aa13□□□□□ -0.33
SRP54-201ENST00000216774 PARP8Q8N3A8 854 aa13□□□□□ -0.33
SRP54-201ENST00000216774 PIK3C3Q8NEB9 887 aa13□□□□□ -0.33
SRP54-201ENST00000216774 FRS2Q8WU20 508 aa13□□□□□ -0.33
SRP54-201ENST00000216774 KLF16Q9BXK1 252 aaPredicted RBP13□□□□□ -0.33
SRP54-201ENST00000216774 PARVBQ9HBI1 364 aa13□□□□□ -0.33
SRP54-201ENST00000216774 LATS2Q9NRM7 1088 aa13□□□□□ -0.33
SRP54-201ENST00000216774 SLC6A13Q9NSD5 602 aa13□□□□□ -0.33
SRP54-201ENST00000216774 PAK1IP1Q9NWT1 392 aaPredicted RBP13□□□□□ -0.33
SRP54-201ENST00000216774 VPS51Q9UID3 782 aa13□□□□□ -0.33
SRP54-201ENST00000216774 FCF1Q9Y324 198 aaKnown RBP13□□□□□ -0.33
SRP54-201ENST00000216774 HSPE1-MOB4S4R3N1 261 aa13□□□□□ -0.33
SRP54-201ENST00000216774 PLXNA4Q9HCM2 1894 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 ZNF99A8MXY4 864 aaPredicted RBP12.99□□□□□ -0.33
SRP54-201ENST00000216774 BOLA2-SMG1P6H3BVE0 249 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 NDUFS2O75306 463 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 UGT2B11O75310 529 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 IRF1P10914 325 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
SRP54-201ENST00000216774 HMGA1P17096 107 aaKnown RBP12.99□□□□□ -0.33
SRP54-201ENST00000216774 CA5AP35218 305 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 BCAP31P51572 246 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 GP2P55259 537 aaKnown RBP12.99□□□□□ -0.33
SRP54-201ENST00000216774 RELAQ04206 551 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 OCA2Q04671 838 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 CDK5R2Q13319 367 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 ZNF846Q147U1 533 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 ANKRD34AQ69YU3 496 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms