RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 C1QTNF3-AMACRE9PGA6 284 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 VARSP26640 1264 aaKnown RBP28.93■■■□□ 2.22
PABPN1-201ENST00000216727 SLC7A1P30825 629 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 ABRQ12979 859 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 KIAA0040Q15053 153 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 EEF1AKMT2Q5JPI9 291 aaKnown RBP28.93■■■□□ 2.22
PABPN1-201ENST00000216727 CACHD1Q5VU97 1274 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 KIAA2013Q8IYS2 634 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 GLB1L3Q8NCI6 653 aaPredicted RBP28.93■■■□□ 2.22
PABPN1-201ENST00000216727 CATSPER1Q8NEC5 780 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 CCDC138Q96M89 665 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 ACPTQ9BZG2 426 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 MUC13Q9H3R2 512 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 DENND4AQ7Z401 1863 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 SERTM1A2A2V5 107 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 NPIPB8E9PQR5 432 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 SEC22BO75396 215 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 PDYNP01213 254 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 CATP04040 527 aaKnown RBP28.93■■■□□ 2.22
PABPN1-201ENST00000216727 PRPH2P23942 346 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 YBX1P67809 324 aaKnown RBP28.93■■■□□ 2.22
PABPN1-201ENST00000216727 GRAMD1BQ3KR37 738 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 HABP4Q5JVS0 413 aaKnown RBP28.93■■■□□ 2.22
PABPN1-201ENST00000216727 SYCE2Q6PIF2 218 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 CYP2R1Q6VVX0 501 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 KLHDC8AQ8IYD2 350 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 ADCY4Q8NFM4 1077 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 OR2T34Q8NGX1 318 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 OR2T3Q8NH03 318 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 DNAJB14Q8TBM8 379 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 PKP2Q99959 881 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 TRIM15Q9C019 465 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 ELOVL6Q9H5J4 265 aa28.93■■■□□ 2.22
PABPN1-201ENST00000216727 GMPR2Q9P2T1 348 aaKnown RBP28.93■■■□□ 2.22
PABPN1-201ENST00000216727 UGDHO60701 494 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 MMP20O60882 483 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 RNASEH2AO75792 299 aaKnown RBP28.92■■■□□ 2.22
PABPN1-201ENST00000216727 RSL1D1O76021 490 aaKnown RBP28.92■■■□□ 2.22
PABPN1-201ENST00000216727 PREPP48147 710 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 MMAAQ8IVH4 418 aaKnown RBP28.92■■■□□ 2.22
PABPN1-201ENST00000216727 GOLM1Q8NBJ4 401 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 SELENOMQ8WWX9 145 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 RAB7BQ96AH8 199 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 ZBTB18Q99592 522 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 ATG10Q9H0Y0 220 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 PRSS16Q9NQE7 514 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 ACTR3BQ9P1U1 418 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 FAM8A1Q9UBU6 413 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 HCN2Q9UL51 889 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 DTNAQ9Y4J8 743 aa28.92■■■□□ 2.22
PABPN1-201ENST00000216727 AQP12BA6NM10 295 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 PLK4O00444 970 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 LZTS3O60299 673 aaPredicted RBP28.91■■■□□ 2.22
PABPN1-201ENST00000216727 KAT7O95251 611 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 GPR1P46091 355 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 AQP4P55087 323 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 EEFSECP57772 596 aaKnown RBP28.91■■■□□ 2.22
PABPN1-201ENST00000216727 MRPS35P82673 323 aaKnown RBP28.91■■■□□ 2.22
PABPN1-201ENST00000216727 RAET1GQ6H3X3 334 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 LCN8Q6JVE9 175 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 AQP12AQ8IXF9 295 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 YAF2Q8IY57 180 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 LILRA3Q8N6C8 439 aaPredicted RBP28.91■■■□□ 2.22
PABPN1-201ENST00000216727 TMEM102Q8N9M5 508 aaPredicted RBP28.91■■■□□ 2.22
PABPN1-201ENST00000216727 NR1H4Q96RI1 486 aaPredicted RBP28.91■■■□□ 2.22
PABPN1-201ENST00000216727 SLAMF8Q9P0V8 285 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 K7ESM1 405 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 LILRB5O75023 590 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 PCSK2P16519 638 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 ITPKAP23677 461 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 PTGR1Q14914 329 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 NANOGP8Q6NSW7 305 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 SLC2A7Q6PXP3 512 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 TICAM1Q8IUC6 712 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 HID1Q8IV36 788 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 MRPL38Q96DV4 380 aaKnown RBP28.91■■■□□ 2.22
PABPN1-201ENST00000216727 FOPNLQ96NB1 174 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 BTBD9Q96Q07 612 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 ALG2Q9H553 416 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 NANOGQ9H9S0 305 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 GULP1Q9UBP9 304 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 MSRAQ9UJ68 235 aa28.91■■■□□ 2.22
PABPN1-201ENST00000216727 ZFC3H1O60293 1989 aaKnown RBP28.9■■■□□ 2.22
PABPN1-201ENST00000216727 KRT87PA6NCN2 255 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 EPHX1P07099 455 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 ATP6V1B2P21281 511 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 CASP2P42575 452 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 ZNF33BQ06732 778 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 RABL3Q5HYI8 236 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 LIPJQ5W064 366 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 ANKRD54Q6NXT1 300 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 DLEU7Q6UYE1 221 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 PTRH1Q86Y79 214 aaKnown RBP28.9■■■□□ 2.22
PABPN1-201ENST00000216727 LIX1Q8N485 282 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 DOCK8Q8NF50 2099 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 SLCO4A1Q96BD0 722 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 ZNF514Q96K75 400 aaPredicted RBP28.9■■■□□ 2.22
PABPN1-201ENST00000216727 PLA2G2FQ9BZM2 168 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 TRIM39Q9HCM9 518 aa28.9■■■□□ 2.22
PABPN1-201ENST00000216727 RANBP2P49792 3224 aaKnown RBP28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms