RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 CA5AP35218 305 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 NSG1P42857 185 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 SLC6A11P48066 632 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 HSPA7P48741 367 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 CREB5Q02930 508 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 FAM78AQ5JUQ0 283 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 BRAT1Q6PJG6 821 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 ADAMTSL2Q86TH1 951 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 ERI1Q8IV48 349 aaKnown RBP8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 LKAAEAR1Q8TD35 194 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 DLG3Q92796 817 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 FGF13Q92913 245 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 LRRC3BQ96PB8 259 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 HBEGFQ99075 208 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 NPAS2Q99743 824 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 CIB1Q99828 191 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 EFCAB1Q9HAE3 211 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 MSRAQ9UJ68 235 aa8.73□□□□□ -1.01
MTHFD1-201ENST00000216605 SH3PXD2BA1X283 911 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 OR2AG2A6NM03 316 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 SNTNA6NMZ2 147 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 HEPACAM2A8MVW5 462 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 C5orf67F2Z3F1 127 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 H3BSA7 217 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 INPP4BO15327 924 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 CNOT3O75175 753 aaKnown RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 ELFN1P0C7U0 828 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 PSMC3P17980 439 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 CDH2P19022 906 aaPredicted RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 MSH3P20585 1137 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 CASP2P42575 452 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 FOXA1P55317 472 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 MYBPC1Q00872 1141 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 LAPTM5Q13571 262 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 C18orf21Q32NC0 220 aaPredicted RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 SETMARQ53H47 684 aaPredicted RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 SGO1Q5FBB7 561 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 TXNDC11Q6PKC3 985 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 BTN2A1Q7KYR7 527 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 RP9Q8TA86 221 aaKnown RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 ULK4Q96C45 1275 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 CPEB1Q9BZB8 566 aaKnown RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 NOL11Q9H8H0 719 aaKnown RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 IL1RL2Q9HB29 575 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 ELOVL2Q9NXB9 296 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 ZDHHC3Q9NYG2 299 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 RSL24D1Q9UHA3 163 aaKnown RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 YBX2Q9Y2T7 364 aaKnown RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 BPTFQ12830 3046 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 FFAR2O15552 330 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 OR4F21O95013 312 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 MLYCDO95822 493 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 HIST1H2AGP0C0S8 130 aaPredicted RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 HGFP14210 728 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 HIST1H2ADP20671 130 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 PBLDP30039 288 aaPredicted RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 MSX2P35548 267 aaPredicted RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 GSSP48637 474 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 SPINT3P49223 89 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 PPM1FP49593 454 aaPredicted RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 CLCN7P51798 805 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 BLVRAP53004 296 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 PKNOX1P55347 436 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 MRPS22P82650 360 aaKnown RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 ISLR2Q6UXK2 745 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 C12orf40Q86WS4 652 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 SLC38A6Q8IZM9 456 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 GALNT4Q8N4A0 578 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 NATD1Q8N6N6 113 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 METTL6Q8TCB7 284 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 COX4I2Q96KJ9 171 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 HIST1H2AHQ96KK5 128 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 CDRT15Q96T59 188 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 ACOX2Q99424 681 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 HIST1H2AJQ99878 128 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 H2AFJQ9BTM1 129 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 TRIM54Q9BYV2 358 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 SLC2A11Q9BYW1 496 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 P2RY12Q9H244 342 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 NSUN3Q9H649 340 aaKnown RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 SFXN1Q9H9B4 322 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 COPS7BQ9H9Q2 264 aaPredicted RBP8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 FANCFQ9NPI8 374 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 C8orf4Q9NR00 106 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 DNAJC15Q9Y5T4 150 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 PTPRSQ13332 1948 aa8.72□□□□□ -1.01
MTHFD1-201ENST00000216605 C9JVG2 144 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 CD1EP15812 388 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 SLC5A2P31639 672 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 WASP42768 502 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 GDF5P43026 501 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 TSTA3Q13630 321 aaPredicted RBP8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 APOFQ13790 326 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 MAPRE2Q15555 327 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 ZNF648Q5T619 568 aaPredicted RBP8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 KIAA1614Q5VZ46 1190 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 BNC2Q6ZN30 1099 aaPredicted RBP8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 GPRIN3Q6ZVF9 776 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.01
MTHFD1-201ENST00000216605 TEX19Q8NA77 164 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms