RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	FBXO38	Q6PIJ6	1188 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	C6orf15	Q6UXA7	325 aa	Predicted RBP	14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	UNC5D	Q6UXZ4	953 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	UNC5A	Q6ZN44	842 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	OTOA	Q7RTW8	1153 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	HOOK3	Q86VS8	718 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	BPHL	Q86WA6	291 aa	Predicted RBP	14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	AGGF1	Q8N302	714 aa	eCLIP	14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	LSM14A	Q8ND56	463 aa	Known RBP	14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	CFAP61	Q8NHU2	1237 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	GSDMB	Q8TAX9	411 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	STAMBPL1	Q96FJ0	436 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	FCRL4	Q96PJ5	515 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	TUBB2B	Q9BVA1	445 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	PITPNM3	Q9BZ71	974 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	FGF21	Q9NSA1	209 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	KCND1	Q9NSA2	647 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	INTS10	Q9NVR2	710 aa	Known RBP	14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	SOHLH2	Q9NX45	425 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	ACTR10	Q9NZ32	417 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	OR6C2	Q9NZP2	312 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	RNF14	Q9UBS8	474 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	CRYL1	Q9Y2S2	319 aa		14.57	□□□□□ -0.08
PHGDH-231	ENST00000641939	ZCWPW2	A0A1B0GU75	182 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	PIPSL	A2A3N6	862 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	CCDC188	H7C350	402 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	FANCG	O15287	622 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	TPBGL	P0DKB5	382 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	IVD	P26440	423 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	STAT5A	P42229	794 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	DR1	Q01658	176 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	LONRF1	Q17RB8	773 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	TAF1B	Q53T94	588 aa	Predicted RBP	14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	PLEKHS1	Q5SXH7	462 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	IZUMO3	Q5VZ72	239 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	ZNF470	Q6ECI4	717 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	PWWP2B	Q6NUJ5	590 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	SPESP1	Q6UW49	350 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	CENPU	Q71F23	418 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	DCUN1D3	Q8IWE4	304 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	GALNT6	Q8NCL4	622 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	OR8K5	Q8NH50	307 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	TTC9	Q92623	222 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	KIAA1143	Q96AT1	154 aa	Predicted RBP	14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	ZNF501	Q96CX3	271 aa	Predicted RBP	14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	RNF31	Q96EP0	1072 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	EFHD1	Q9BUP0	239 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	GPN2	Q9H9Y4	310 aa	Predicted RBP	14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	FANCE	Q9HB96	536 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	C20orf96	Q9NUD7	363 aa	Predicted RBP	14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	LNPEP	Q9UIQ6	1025 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	PLAGL1	Q9UM63	463 aa		14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	FASN	P49327	2511 aa	Known RBP	14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	TLN1	Q9Y490	2541 aa	Known RBP	14.56	□□□□□ -0.08
PHGDH-231	ENST00000641939	LOC101059948	A0A1B0GTJ6	334 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	EIF4E1B	A6NMX2	242 aa	Known RBP	14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	TK2	O00142	265 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	MAP3K7	O43318	606 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	NIPSNAP2	O75323	286 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	TIAF1	O95411	115 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	S1PR4	O95977	384 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	CHRM5	P08912	532 aa	Predicted RBP	14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	PKM	P14618	531 aa	Known RBP	14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	ST6GAL1	P15907	406 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	RAB28	P51157	221 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	CTBP1	Q13363	440 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	MORF4L2	Q15014	288 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	GPR19	Q15760	415 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	KYNU	Q16719	465 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	PCSK4	Q6UW60	755 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	DENND6A	Q8IWF6	608 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	LMNTD2	Q8IXW0	634 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	UNC5B	Q8IZJ1	945 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	CALML6	Q8TD86	181 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	SKA2	Q8WVK7	121 aa	Predicted RBP	14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	SLC39A7	Q92504	469 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	WBP1	Q96G27	269 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	TRAPPC9	Q96Q05	1148 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	SLC12A9	Q9BXP2	914 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	SYTL2	Q9HCH5	934 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	FAM169A	Q9Y6X4	670 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	SPTA1	P02549	2419 aa		14.55	□□□□□ -0.08
PHGDH-231	ENST00000641939	ANKRD12	Q6UB98	2062 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	CFAP46	Q8IYW2	2715 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939		E5RI56	91 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	MT-ND3	P03897	115 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	PVR	P15151	417 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	UGT2B7	P16662	529 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	PGAM1	P18669	254 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	CHRM3	P20309	590 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	PKLR	P30613	574 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	DHX9	Q08211	1270 aa	Known RBP	14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	KIR2DS3	Q14952	304 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	ZNF789	Q5FWF6	425 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	TTC23L	Q6PF05	361 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	FAM136A	Q96C01	138 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	SLC45A3	Q96JT2	553 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	FOPNL	Q96NB1	174 aa		14.54	□□□□□ -0.08
PHGDH-231	ENST00000641939	OR2A14	Q96R47	310 aa		14.54	□□□□□ -0.08

Retrieved 100 of 20,778 RNA–protein pairs in 359.5 ms