RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 FAM8A1Q9UBU6 413 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 SUFUQ9UMX1 484 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 PRKAB1Q9Y478 270 aa9.2□□□□□ -0.94
PHGDH-228ENST00000641847 TP53BP1Q12888 1972 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-228ENST00000641847 SPTBN1Q01082 2364 aaKnown RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 A0A087X1B8 175 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 HMGB1P1B2RPK0 211 aaPredicted RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 H3BQF6 201 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 CHUKO15111 745 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 SCAMP1O15126 338 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 POP7O75817 140 aaKnown RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 WISP3O95389 354 aaPredicted RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 C2P06681 752 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 PYGBP11216 843 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 ACP5P13686 325 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 ZNF37AP17032 561 aaPredicted RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 KRT4P19013 534 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 CD9P21926 228 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 CCR7P32248 378 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 GMPRP36959 345 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 MAGOHP61326 146 aaKnown RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 BOP1Q14137 746 aaKnown RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 PTK2BQ14289 1009 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 INSCQ1MX18 579 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 ALG11Q2TAA5 492 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 TTLL9Q3SXZ7 439 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 LINC00303Q3SY05 128 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 UGT3A1Q6NUS8 523 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 NAPRTQ6XQN6 538 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 RBM44Q6ZP01 1051 aaKnown RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 OTOAQ7RTW8 1153 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 TBC1D1Q86TI0 1168 aaPredicted RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 PARGQ86W56 976 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 SPATS2Q86XZ4 545 aaKnown RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 CPNE9Q8IYJ1 553 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 SLC25A45Q8N413 288 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 IFI44Q8TCB0 444 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 ACMSDQ8TDX5 336 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 INPP5DQ92835 1189 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 TSACCQ96A04 125 aaPredicted RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 SCARF2Q96GP6 870 aaPredicted RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 APOPT1Q96IL0 206 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 CABS1Q96KC9 395 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 LINC00615Q96LM1 132 aaPredicted RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 OR2M4Q96R27 311 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 SMC6Q96SB8 1091 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 TIMM29Q9BSF4 260 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 CCM2Q9BSQ5 444 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 CYP4F12Q9HCS2 524 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 MED4Q9NPJ6 270 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 SPATS2LQ9NUQ6 558 aaKnown RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 NLGN3Q9NZ94 848 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 TSR3Q9UJK0 312 aaKnown RBP9.19□□□□□ -0.94
PHGDH-228ENST00000641847 TLK1Q9UKI8 766 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 GPR34Q9UPC5 381 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 MAN2B2Q9Y2E5 1009 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 PIKFYVEQ9Y2I7 2098 aa9.19□□□□□ -0.94
PHGDH-228ENST00000641847 SPTY2D1-AS1A0A0U1RR47 76 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 CDRT15L2A8MXV6 281 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 COPEO14579 308 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 TNFRSF10CO14798 259 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 KPNA5O15131 536 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 KMOO15229 486 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 SPAG7O75391 227 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 RASGRP1O95267 797 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 FUCA1P04066 466 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 APOA4P06727 396 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 GSTM1P09488 218 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 AOAHP28039 575 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 SKIV2L2P42285 1042 aaKnown RBP9.18□□□□□ -0.94
PHGDH-228ENST00000641847 SRP54P61011 504 aaKnown RBP9.18□□□□□ -0.94
PHGDH-228ENST00000641847 GSTM4Q03013 218 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 EIF2B5Q13144 721 aaKnown RBP9.18□□□□□ -0.94
PHGDH-228ENST00000641847 FZD2Q14332 565 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 ITPR2Q14571 2701 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 PYCR3Q53H96 274 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 ACSBG2Q5FVE4 666 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 PAQR3Q6TCH7 311 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 TMEM207Q6UWW9 146 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 SH2D5Q6ZV89 423 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 CHST15Q7LFX5 561 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-228ENST00000641847 CCDC91Q7Z6B0 441 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 C11orf96Q7Z7L8 435 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 CLEC14AQ86T13 490 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 EXOC3L1Q86VI1 746 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 AMZ2Q86W34 360 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 DCP2Q8IU60 420 aaKnown RBP9.18□□□□□ -0.94
PHGDH-228ENST00000641847 HID1Q8IV36 788 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 OR2L2Q8NH16 312 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 WDR48Q8TAF3 677 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 HM13Q8TCT9 377 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 KCTD4Q8WVF5 259 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 LINGO1Q96FE5 620 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 APOLD1Q96LR9 279 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 TSNARE1Q96NA8 513 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 SLC13A1Q9BZW2 595 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 COG4Q9H9E3 785 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 SYTL2Q9HCH5 934 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 MKS1Q9NXB0 559 aa9.18□□□□□ -0.94
PHGDH-228ENST00000641847 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms