RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 RASGRP3Q8IV61 690 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 SLC22A15Q8IZD6 547 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 AFAP1L2Q8N4X5 818 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 FITM2Q8N6M3 262 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 DENND6BQ8NEG7 585 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 OR2L2Q8NH16 312 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 HM13Q8TCT9 377 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 CCT6BQ92526 530 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 ESAMQ96AP7 390 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 RHBDF1Q96CC6 855 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 FAR2Q96K12 515 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 RILPQ96NA2 401 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 HHIPQ96QV1 700 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 MYOCQ99972 504 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 APOOQ9BUR5 198 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 EDEM2Q9BV94 578 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 SMOC1Q9H4F8 434 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 TNFRSF12AQ9NP84 129 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 MID1IP1Q9NPA3 183 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 WWOXQ9NZC7 414 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 GULP1Q9UBP9 304 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 CYP8B1Q9UNU6 501 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 APOBEC2Q9Y235 224 aaKnown RBP12.8□□□□□ -0.36
PHGDH-221ENST00000641573 PRKAB1Q9Y478 270 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 ASB1Q9Y576 335 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 DNMT3AQ9Y6K1 912 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-221ENST00000641573 PABPN1LA6NDY0 278 aaKnown RBP12.79□□□□□ -0.36
PHGDH-221ENST00000641573 GPR89AB7ZAQ6 455 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 H3BM21 787 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 CACNB4O00305 520 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-221ENST00000641573 PPP6CO00743 305 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 KMOO15229 486 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 DIAPH2O60879 1101 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 ANXA5P08758 320 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 HIST1H2AGP0C0S8 130 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-221ENST00000641573 GPR89BP0CG08 455 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 HIST1H2ADP20671 130 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 SERPINB3P29508 390 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 PDHA2P29803 388 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 MAPK9P45984 424 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 HSPA7P48741 367 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 CDKL1Q00532 357 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 PLOD1Q02809 727 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-221ENST00000641573 LCP2Q13094 533 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 PLA2G2CQ5R387 149 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 XKR5Q6UX68 686 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 MBOAT1Q6ZNC8 495 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 MTDHQ86UE4 582 aaKnown RBP12.79□□□□□ -0.36
PHGDH-221ENST00000641573 AMZ2Q86W34 360 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 KIRREL3Q8IZU9 778 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 OR56A4Q8NGH8 313 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 CFAP61Q8NHU2 1237 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 MAPK15Q8TD08 544 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 MCOLN3Q8TDD5 553 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 UBTD2Q8WUN7 234 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 SKA1Q96BD8 255 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 HIST1H2AHQ96KK5 128 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 LRRC37BQ96QE4 947 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 HIST1H2AJQ99878 128 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 TMEM79Q9BSE2 394 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 H2AFJQ9BTM1 129 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 HGH1Q9BTY7 390 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 CD244Q9BZW8 370 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 MYLK2Q9H1R3 596 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 SEMA4BQ9NPR2 832 aaPredicted RBP12.79□□□□□ -0.36
PHGDH-221ENST00000641573 ARL15Q9NXU5 204 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 FIS1Q9Y3D6 152 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 TRAF6Q9Y4K3 522 aa12.79□□□□□ -0.36
PHGDH-221ENST00000641573 ATXN2Q99700 1313 aaKnown RBP12.79□□□□□ -0.36
PHGDH-221ENST00000641573 NBEAQ8NFP9 2946 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 SDK1Q7Z5N4 2213 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 E2F3O00716 465 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 FPGTO14772 594 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 PSIP1O75475 530 aaKnown RBP12.78□□□□□ -0.36
PHGDH-221ENST00000641573 UBOX5O94941 541 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 MLYCDO95822 493 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 CATP04040 527 aaKnown RBP12.78□□□□□ -0.36
PHGDH-221ENST00000641573 HOXC4P09017 264 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-221ENST00000641573 HNRNPA2B1P22626 353 aaKnown RBP12.78□□□□□ -0.36
PHGDH-221ENST00000641573 MAP4P27816 1152 aaKnown RBP12.78□□□□□ -0.36
PHGDH-221ENST00000641573 OXTRP30559 389 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 AP1S2P56377 157 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 CLDN2P57739 230 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 SH3BP2P78314 561 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 TUBB3Q13509 450 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 NFE2L1Q14494 772 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 PDCD2Q16342 344 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-221ENST00000641573 RBBP7Q16576 425 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 SLC9B1Q4ZJI4 515 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 FAM83HQ6ZRV2 1179 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-221ENST00000641573 GOLGA7Q7Z5G4 137 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 YTHDF3Q7Z739 585 aaKnown RBP12.78□□□□□ -0.36
PHGDH-221ENST00000641573 CLYBLQ8N0X4 340 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 TCAIMQ8N3R3 496 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 OXR1Q8N573 874 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 AGAP11Q8TF27 550 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 ERP27Q96DN0 273 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 TOE1Q96GM8 510 aaKnown RBP12.78□□□□□ -0.36
PHGDH-221ENST00000641573 FOPNLQ96NB1 174 aa12.78□□□□□ -0.36
PHGDH-221ENST00000641573 SCNM1Q9BWG6 230 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms