RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PROSER1Q86XN7 944 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 PAPD5Q8NDF8 572 aaKnown RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 OR5H6Q8NGV6 325 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 VANGL1Q8TAA9 524 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 TSEN34Q9BSV6 310 aaKnown RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 ZNF717Q9BY31 904 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 BPIFA1Q9NP55 256 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 RCOR3Q9P2K3 495 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 UXTQ9UBK9 157 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-227ENST00000640957 CDH9Q9ULB4 789 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 BTBD3Q9Y2F9 522 aa13.49□□□□□ -0.25
SCARB2-227ENST00000640957 A0A0X1KG70 313 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 ZNF487B1APH4 448 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 OR1I1O60431 355 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 GGT1P19440 569 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 DAPP51397 102 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 CBX2Q14781 532 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-227ENST00000640957 ZNF438Q7Z4V0 828 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 HIPK1Q86Z02 1210 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 CNTN4Q8IWV2 1026 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 TTC29Q8NA56 475 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-227ENST00000640957 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 TSPAN17Q96FV3 270 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 C16orf70Q9BSU1 422 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 CDADC1Q9BWV3 514 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 NECTIN3Q9NQS3 549 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 A8MUA0 341 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 MAFKO60675 156 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 TMCC2O75069 709 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 B3GAT3O94766 335 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 HMBSP08397 361 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 SMIM10L2AP0DMW4 78 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 SMIM10L2BP0DMW5 78 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 C7P10643 843 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 HOXA11P31270 313 aaPredicted RBP13.48□□□□□ -0.25
SCARB2-227ENST00000640957 CLCN5P51795 746 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 SLC35A2P78381 396 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 CCL14Q16627 93 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 LRRC26Q2I0M4 334 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 SDHAF4Q5VUM1 108 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 LETMD1Q6P1Q0 360 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 GPR21Q99679 349 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 TMLHEQ9NVH6 421 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 SMPD4Q9NXE4 827 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 GPR83Q9NYM4 423 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 TAS2R9Q9NYW1 312 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 TEKT2Q9UIF3 430 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 SLC6A14Q9UN76 642 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 RNF6Q9Y252 685 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 ITM2BQ9Y287 266 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 TPRKBQ9Y3C4 175 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 SPEF1Q9Y4P9 236 aa13.48□□□□□ -0.25
SCARB2-227ENST00000640957 PABPN1LA6NDY0 278 aaKnown RBP13.47□□□□□ -0.25
SCARB2-227ENST00000640957 CXCL11O14625 94 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 PCDHGA12O60330 932 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 MGEA5O60502 916 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 SLC2A3P11169 496 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 TNFRSF1BP20333 461 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 HTR3AP46098 478 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 TIGD6Q17RP2 521 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 ARMC4Q5T2S8 1044 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 SIGIRRQ6IA17 410 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 KIAA0930Q6ICG6 404 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-227ENST00000640957 RANBP10Q6VN20 620 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 ABI3BPQ7Z7G0 1075 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 CCDC71Q8IV32 467 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-227ENST00000640957 SIDT2Q8NBJ9 832 aaKnown RBP13.47□□□□□ -0.25
SCARB2-227ENST00000640957 MINDY2Q8NBR6 621 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 PHF10Q8WUB8 498 aaKnown RBP13.47□□□□□ -0.25
SCARB2-227ENST00000640957 RHBDF1Q96CC6 855 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 TPD52L3Q96J77 140 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 TTPALQ9BTX7 342 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 UGT2B28Q9BY64 529 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 ACTL8Q9H568 366 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 MOV10Q9HCE1 1003 aaKnown RBP13.47□□□□□ -0.25
SCARB2-227ENST00000640957 MUTYHQ9UIF7 546 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 MIA3Q5JRA6 1907 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 A0A1W2PQ72 361 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 NIPSNAP2O75323 286 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 STSP08842 583 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 GRK3P35626 688 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 LILRA4P59901 499 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 ZXDBP98169 803 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 TIAL1Q01085 375 aaKnown RBP eCLIP13.47□□□□□ -0.25
SCARB2-227ENST00000640957 SPANXN2Q5MJ10 180 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 TAPT1Q6NXT6 567 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 ZDHHC21Q8IVQ6 265 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 ARHGAP12Q8IWW6 846 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 PHOX2BQ99453 314 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 SMOQ99835 787 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 GTF2IRD1Q9UHL9 959 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 OR6C70A6NIJ9 312 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 PER2O15055 1255 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 MATN4O95460 622 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 HAPLN1P10915 354 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-227ENST00000640957 TGFBR2P37173 567 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 GEMP55040 296 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 P2RX3P56373 397 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 DAOAP59103 153 aa13.47□□□□□ -0.25
SCARB2-227ENST00000640957 ERVPABLB-1P60509 514 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms