RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 COL16A1Q07092 1604 aaPredicted RBP17.23■□□□□ 0.35
SCARB2-223ENST00000640640 TRIM43BA6NCK2 446 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 hCG_2039718K7EN88 272 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 AGRPO00253 132 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 ITGB1P05556 798 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 ATP1B2P14415 290 aaPredicted RBP17.23■□□□□ 0.35
SCARB2-223ENST00000640640 VARSP26640 1264 aaKnown RBP17.23■□□□□ 0.35
SCARB2-223ENST00000640640 FGD2Q7Z6J4 655 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 FLCNQ8NFG4 579 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 TEX47Q8TBZ9 253 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 HERVK_113Q902F9 699 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 TTLL2Q9BWV7 592 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 HDHD2Q9H0R4 259 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 IL36AQ9UHA7 158 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 MYH7BA7E2Y1 1941 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 ZNF840PA6NDX5 716 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 LOC730098B7Z3J9 87 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 EI24O14681 340 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 ADAMDEC1O15204 470 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 STX11O75558 287 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 SERPINA1P01009 418 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 ENO2P09104 434 aaPredicted RBP17.23■□□□□ 0.35
SCARB2-223ENST00000640640 PSMA3P25788 255 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 GKP32189 559 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 TAS2R41P59536 307 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 ILF3Q12906 894 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCARB2-223ENST00000640640 LY6G5CQ5SRR4 150 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 MRPL10Q7Z7H8 261 aaKnown RBP17.23■□□□□ 0.35
SCARB2-223ENST00000640640 LUZP2Q86TE4 346 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 PGAP3Q96FM1 320 aaPredicted RBP17.23■□□□□ 0.35
SCARB2-223ENST00000640640 EFCAB11Q9BUY7 163 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 GIMAP2Q9UG22 337 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 TLL2Q9Y6L7 1015 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 A0A1W2PP18 115 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 PIPSLA2A3N6 862 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 OR6B1O95007 311 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 PLA2G16P53816 162 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 STX4Q12846 297 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 PDGFRLQ15198 375 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 PM20D1Q6GTS8 502 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 MMAAQ8IVH4 418 aaKnown RBP17.23■□□□□ 0.35
SCARB2-223ENST00000640640 LCN9Q8WX39 176 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 KLK6Q92876 244 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 NUS1Q96E22 293 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 PTPN18Q99952 460 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 PLGRKTQ9HBL7 147 aa17.23■□□□□ 0.35
SCARB2-223ENST00000640640 STX16O14662 325 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 OR6A2O95222 327 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 ZNF30P17039 623 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 DDX6P26196 483 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCARB2-223ENST00000640640 GSK3BP49841 420 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 PTCHD3Q3KNS1 767 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 ATP13A5Q4VNC0 1218 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 KLHL35Q6PF15 583 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 SMG9Q9H0W8 520 aaKnown RBP17.22■□□□□ 0.35
SCARB2-223ENST00000640640 POPDC3Q9HBV1 291 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 TOR4AQ9NXH8 423 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 FLRT1Q9NZU1 646 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 USP54Q70EL1 1684 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 SCAMP1O15126 338 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 ARPC2O15144 300 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 PCDH7O60245 1069 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 ADH5P11766 374 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 GMPRP36959 345 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 NIPAL4Q0D2K0 466 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 HSPB3Q12988 150 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 TECRLQ5HYJ1 363 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 FEM1AQ9BSK4 669 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 B4GALT6Q9UBX8 382 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 UPK3BL1B0FP48 263 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 UPK3BL2E5RIL1 263 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 M0QZQ0 153 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 RASGRP1O95267 797 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 MYCLP1P12525 358 aaPredicted RBP17.22■□□□□ 0.35
SCARB2-223ENST00000640640 CMPK1P30085 196 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 VIPR1P32241 457 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 YAP1P46937 504 aaKnown RBP17.22■□□□□ 0.35
SCARB2-223ENST00000640640 UFM1P61960 85 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 GPM6BQ13491 265 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 LRRC70Q7Z2Q7 622 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 GOLGA7Q7Z5G4 137 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 C12orf66Q96MD2 445 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 CRISPLD1Q9H336 500 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 ANKRD12Q6UB98 2062 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 LEFTY2O00292 366 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 ANGPT1Q15389 498 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 CEP97Q8IW35 865 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 NXPE1Q8N323 547 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 SVOPLQ8N434 492 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 CAMKK1Q8N5S9 505 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 PIK3C3Q8NEB9 887 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 PCBD2Q9H0N5 130 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 WDR6Q9NNW5 1121 aaKnown RBP17.22■□□□□ 0.35
SCARB2-223ENST00000640640 OSER1Q9NX31 292 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 EHD3Q9NZN3 535 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 DNAJB9Q9UBS3 223 aa17.22■□□□□ 0.35
SCARB2-223ENST00000640640 SOCS7O14512 581 aa17.21■□□□□ 0.35
SCARB2-223ENST00000640640 RHDQ02161 417 aa17.21■□□□□ 0.35
SCARB2-223ENST00000640640 TEAD2Q15562 447 aa17.21■□□□□ 0.35
SCARB2-223ENST00000640640 ZBTB6Q15916 424 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms