RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	RAB28	P51157	221 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	KPNA2	P52292	529 aa	Known RBP	13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	CSE1L	P55060	971 aa	Known RBP	13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	FOXM1	Q08050	763 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	ABR	Q12979	859 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	CTBP1	Q13363	440 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	MAP7	Q14244	749 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	GBX1	Q14549	363 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	KIR2DS3	Q14952	304 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	WHAMMP3	Q1A5X7	153 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	COL28A1	Q2UY09	1125 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	MSS51	Q4VC12	460 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	LRRC8E	Q6NSJ5	796 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	C19orf48	Q6RUI8	117 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	NAPRT	Q6XQN6	538 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	UNC5A	Q6ZN44	842 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	ZFAND4	Q86XD8	727 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	DENND6A	Q8IWF6	608 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	CNTN4	Q8IWV2	1026 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	ADGRF3	Q8IZF5	1079 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	ZBTB2	Q8N680	514 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	LKAAEAR1	Q8TD35	194 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	JPH3	Q8WXH2	748 aa	Predicted RBP	13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	TRIM56	Q9BRZ2	755 aa	Known RBP	13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	EFHD1	Q9BUP0	239 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	PITPNM3	Q9BZ71	974 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	TRIM31	Q9BZY9	425 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	SPRY4	Q9C004	299 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	PHACTR1	Q9C0D0	580 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	CHRNA10	Q9GZZ6	450 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	RARRES3	Q9UL19	164 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	ICK	Q9UPZ9	632 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	BTRC	Q9Y297	605 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	TDRKH	Q9Y2W6	561 aa	Known RBP	13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	SNX24	Q9Y343	169 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	TEX264	Q9Y6I9	313 aa		13.83	□□□□□ -0.2
SDHD-209	ENST00000640554	ZZEF1	O43149	2961 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	PIPSL	A2A3N6	862 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554		E7ESA3	106 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	BTN3A3	O00478	584 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	BTN3A1	O00481	513 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	NIPSNAP2	O75323	286 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	KRT37	O76014	449 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	MATN4	O95460	622 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	MT-ND3	P03897	115 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	ENO3	P13929	434 aa	Predicted RBP	13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	CD9	P21926	228 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	SLC1A2	P43004	574 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	TUBB4B	P68371	445 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	VAC14	Q08AM6	782 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	MANEA	Q5SRI9	462 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	STEAP4	Q687X5	459 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	DUPD1	Q68J44	220 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	CCDC81	Q6ZN84	652 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	GPR155	Q7Z3F1	870 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	PPP1R3B	Q86XI6	285 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	VRK3	Q8IV63	474 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	ZSCAN1	Q8NBB4	408 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	MNS1	Q8NEH6	495 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	SKA2	Q8WVK7	121 aa	Predicted RBP	13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	INPP5D	Q92835	1189 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	CERS2	Q96G23	380 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	C16orf45	Q96MC5	204 aa	Predicted RBP	13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	OR6C1	Q96RD1	312 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	TWSG1	Q9GZX9	223 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	PRORY	Q9H606	182 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	FANCE	Q9HB96	536 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	FAM114A2	Q9NRY5	505 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	IARS2	Q9NSE4	1012 aa	Known RBP	13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	ACTR10	Q9NZ32	417 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	LNPEP	Q9UIQ6	1025 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	PILRA	Q9UKJ1	303 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	SLC39A10	Q9ULF5	831 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	DHRS7	Q9Y394	339 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	PKD1L2	Q7Z442	2459 aa		13.82	□□□□□ -0.2
SDHD-209	ENST00000640554	TP73	O15350	636 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	RAD51C	O43502	376 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	VPS26A	O75436	327 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	URI1	O94763	535 aa	Predicted RBP	13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	C1orf105	O95561	183 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	CHRM5	P08912	532 aa	Predicted RBP	13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	ERVK-10	P10266	1014 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	HSD17B2	P37059	387 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	CLCN7	P51798	805 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	PPP1CA	P62136	330 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	PDIA2	Q13087	525 aa	Known RBP	13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	TUBB3	Q13509	450 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	SLC5A12	Q1EHB4	618 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	SPESP1	Q6UW49	350 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	CYS1	Q717R9	158 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	RASGRP3	Q8IV61	690 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	NLGN4X	Q8N0W4	816 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	ESX1	Q8N693	406 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	IL22RA1	Q8N6P7	574 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	CFAP61	Q8NHU2	1237 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	NKD1	Q969G9	470 aa		13.81	□□□□□ -0.2
SDHD-209	ENST00000640554	TCTN2	Q96GX1	697 aa		13.81	□□□□□ -0.2

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