RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 RAB2BQ8WUD1 216 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 NT5C1AQ9BXI3 368 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 NEUROG2Q9H2A3 272 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 HSD3B7Q9H2F3 369 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SPNS1Q9H2V7 528 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 MKNK2Q9HBH9 465 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 GLOD4Q9HC38 313 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 LRRC4BQ9NT99 713 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 EVA1BQ9NVM1 165 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SMPD3Q9NY59 655 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 LIPT1Q9Y234 373 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 PLA2R1Q13018 1463 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 DOCK7Q96N67 2140 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 CCSO14618 274 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 BANF1O75531 89 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SLC11A1P49279 550 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 PCBP1Q15365 356 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCN3A-209ENST00000639244 FAM214AQ32MH5 1076 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 RFX4Q33E94 735 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 INAVAQ3KP66 663 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 GALNTL6Q49A17 601 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 COLEC12Q5KU26 742 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ATCAYQ86WG3 371 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 MMGT1Q8N4V1 131 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SLC35G2Q8TBE7 412 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 BLOC1S5Q8TDH9 187 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 TRIB2Q92519 343 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ZSWIM3Q96MP5 696 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 RNF145Q96MT1 663 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 FCRL4Q96PJ5 515 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 GOLPH3Q9H4A6 298 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 BFARQ9NZS9 450 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SEC14L4Q9UDX3 406 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 CLEC2DQ9UHP7 191 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 ZFP69BQ9UJL9 534 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 FEM1BQ9UK73 627 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 PCDHGB2Q9Y5G2 931 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 WIF1Q9Y5W5 379 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 SMCHD1A6NHR9 2005 aa4.24□□□□□ -1.73
SCN3A-209ENST00000639244 CACNA1CQ13936 2221 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 MEIS2O14770 477 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 OR6B1O95007 311 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ERCC1P07992 297 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 CLEC2LP0C7M8 214 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ETS1P14921 441 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ZP3P21754 424 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 CPN2P22792 545 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SFNP31947 248 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 CLCN7P51798 805 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SRSF11Q05519 484 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PTPN11Q06124 597 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SELENBP1Q13228 472 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SURF1Q15526 300 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TSTQ16762 297 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 MEDAGQ5VYS4 303 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TRAPPC11Q7Z392 1133 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ZFAND4Q86XD8 727 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SELENOHQ8IZQ5 122 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 OR52J3Q8NH60 311 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 C16orf78Q8WTQ4 265 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TCTEX1D2Q8WW35 142 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 KIAA1191Q96A73 305 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF2Q9BSG1 426 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 DNTTIP1Q9H147 329 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 KAT8Q9H7Z6 458 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SEPSECSQ9HD40 501 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 NRIP3Q9NQ35 241 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PPT2Q9UMR5 302 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 H2AFYO75367 372 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 MMP3P08254 477 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GSTP1P09211 210 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ERCC2P18074 760 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 MC3RP41968 323 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 UBE2G2P60604 165 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PSME3P61289 254 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 FOXK2Q01167 660 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 FGL1Q08830 312 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ADGRE1Q14246 886 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GUK1Q16774 197 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SVOPLQ8N434 492 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TDRD5Q8NAT2 981 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 NEK7Q8TDX7 302 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 OTULINQ96BN8 352 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF668Q96K58 619 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TCF7L1Q9HCS4 588 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TLR8Q9NR97 1041 aaKnown RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 SEPT9Q9UHD8 586 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 MAP3K2Q9Y2U5 619 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 A8MUA0 341 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 ABCD4O14678 606 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 COCHO43405 550 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 RECQL5O94762 991 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 UBXN7O94888 489 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 TDP2O95551 362 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 AP2A1O95782 977 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 CD3GP09693 182 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 CD8BP10966 210 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 PIM1P11309 404 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-209ENST00000639244 FDFT1P37268 417 aa4.23□□□□□ -1.73
SCN3A-209ENST00000639244 GRB10Q13322 594 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms